Gene Strop_1571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1571 
Symbol 
ID5058024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1785030 
End bp1785770 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content76% 
IMG OID640473839 
Productdethiobiotin synthase 
Protein accessionYP_001158415 
Protein GI145594118 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0132] Dethiobiotin synthetase 
TIGRFAM ID[TIGR00347] dethiobiotin synthase 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.706287 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCGCCG TGAGTGGGAC GCCGTGGCGG GGGCCAGTGC TGGTGACCGG CACCGACACC 
GGGGTCGGCA AGACCGTGGC GACCGCGGCG GTCACGGCGG CGGCACAGGC CGCCGGGCTG
CGGGTCGCGG TGGTCAAGCC GGGCCAGACC GGTACGGCCA CCGGCGACCC GGTCGACATC
GACGAAGTCA CCCGACTCGC CGCGCCGCTC ACCGGGCGGA CGCTGGCGAG CTTCCCGGAT
CCGCTGGCCC CGCTGCCAGC GGCCCGGGTC GCCGAGTTGC CGCCACTGGA GCTGTACACG
GCGGTTGACG CCGTCCGCGA GGAGGTCGAC AAGCACGACC TGGTCCTGGT CGAGGGGGCC
GGCGGGCTGC TCGTGCCGAT GGGCCTGCGC CCCTCGGGTG AGCCGTGGAC GATGGCCGAT
CTCGCGGTCT CCCTCGGCTG TCCGGCCGTG GTGGTGGCGC GGGCCGGGCT GGGCACCCTC
AACCACACCG CGCTCACCCT GGAGGCGTTG GAACGCCGGG CGGTGCCGGC GGGGGTGCTG
CTCGGCGCCT GGCCGGCCGA GCCGGAGCTG GTCCACTGGG CGAACCTGAC CGACCTGGTG
CCGTACCTGC TCGGCGCGTT GCCGGCCGGG GCCGGGGCGA TCGATCCGGG CGTGTTCCGG
CGGTCCGCGC CGGGGTGGCT CACCCCGGCG CTGTACGGGG TGCTCGACGA CTGGCGGGCC
TGGGCCGAGG AGATCCGCTG A
 
Protein sequence
MRAVSGTPWR GPVLVTGTDT GVGKTVATAA VTAAAQAAGL RVAVVKPGQT GTATGDPVDI 
DEVTRLAAPL TGRTLASFPD PLAPLPAARV AELPPLELYT AVDAVREEVD KHDLVLVEGA
GGLLVPMGLR PSGEPWTMAD LAVSLGCPAV VVARAGLGTL NHTALTLEAL ERRAVPAGVL
LGAWPAEPEL VHWANLTDLV PYLLGALPAG AGAIDPGVFR RSAPGWLTPA LYGVLDDWRA
WAEEIR