Gene Strop_1570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1570 
Symbol 
ID5058023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1783906 
End bp1785042 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content75% 
IMG OID640473838 
Product8-amino-7-oxononanoate synthase 
Protein accessionYP_001158414 
Protein GI145594117 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes 
TIGRFAM ID[TIGR00858] 8-amino-7-oxononanoate synthase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.51631 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGGACT GGCTTGCGGC ACTGGACCGT CGAGCCGAGC TGCGCGCCAA GGCGGGGCTG 
ACCCGCACCC TCCGCCCTCG CGCCGCCGCC GACGACATTG TTGATCTGGC CGGCAACGAC
TACCTCGGCC TGTCGCGGCA TCCCGTGGTG ACCGCGGCGG CCACCGCGGC GCTCGACGAG
TACGGGCTGG GCGCCACCGG GTCCCGGCTG GTGCGTGGCT CGACCGCACC GCACCACGCC
CTCGAGGAGG ATCTGGCCGG CTGGCTCGGG GCCGAACGCG CCCTGCTCTT CTCCTCCGGC
TACCTGGCCA ACGTCGGCGC GGTCCGGGGC CTGGTGCGGC CGCGGACGCT CCTGGTCTCC
GACGCGCACA ACCACGCATC GCTGATCGAC GGGTGCCGGA TCTCCGGTGC GGAGACCGTG
GTGACCCCGC ACGCCGACGT GGACGCGGTG CGGGCCGCGC TCGCCGCCAC GCCGGGCCGC
CCGGCGGTGG TGGTCACCGA GTCGGTGTTC TCGGTTGACG GGGATCTTGC CCCCCTCGCT
GAGCTGCACG CGGTCGCCCG GGCGCACGAC GCGTTGCTGC TGGTTGACGA CGCCCACGGG
CTCGGCGTGG TCGGGCCCGG TGGTGCCGGG GGAGCGACCG CGGCCGATCT GGCCGGTGAA
CCGGACGTGA TTGTCACCGC GACCCTCTCC AAGGCGCTGG GAGGGGCCGG CGGAGTGGTC
GCCGCTCCGG CGGAGTTCGT GCGGCACCTG GTCGAGACCG GGCGGACGTT CATCTTCGAC
ACCGCCCCGC CGCCCGCGGT GGTGGCCGGG GTCCGGGCCG CCATGGGGCT CGCCTGGAGG
GGCGAGCAGC TGCGGGCGGA GTTGGGCGAT CGGGTCGCGT TCGCGGTCCG GCGATTGCGC
GCCGCCGGGC TGACCGGGTC GGCGCCGAAG GGCGCGGTCG TGTCGGTGAC CGCACCCGGC
CCCGAGGCGG CCACCGCCTG GGCCACCGAC TGCCGAGACC GGGGCGTCGC GGTCGGCTGC
TTCCGTCCCC CCTCCACCCC GGACAGTCGT TCCCGGCTCC GGCTGACCGT CAACGTCGGT
GTTCCACGGG CGGACTTCGA GCGGGCCCTG GAGGTCGTCG TGGAGTGCGC GCCGTGA
 
Protein sequence
MSDWLAALDR RAELRAKAGL TRTLRPRAAA DDIVDLAGND YLGLSRHPVV TAAATAALDE 
YGLGATGSRL VRGSTAPHHA LEEDLAGWLG AERALLFSSG YLANVGAVRG LVRPRTLLVS
DAHNHASLID GCRISGAETV VTPHADVDAV RAALAATPGR PAVVVTESVF SVDGDLAPLA
ELHAVARAHD ALLLVDDAHG LGVVGPGGAG GATAADLAGE PDVIVTATLS KALGGAGGVV
AAPAEFVRHL VETGRTFIFD TAPPPAVVAG VRAAMGLAWR GEQLRAELGD RVAFAVRRLR
AAGLTGSAPK GAVVSVTAPG PEAATAWATD CRDRGVAVGC FRPPSTPDSR SRLRLTVNVG
VPRADFERAL EVVVECAP