Gene Strop_1563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1563 
Symbol 
ID5058016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1776551 
End bp1777615 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content72% 
IMG OID640473831 
Productaminoglycoside phosphotransferase 
Protein accessionYP_001158407 
Protein GI145594110 
COG category[R] General function prediction only 
COG ID[COG3173] Predicted aminoglycoside phosphotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.364356 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.663698 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGC CGGCCATCGA CGACTGCGCC CCGACCCCGC CCGGTCTTGA CCTGGACCGG 
CTCGCCGGGC ACCTCGCCGC GCACCGGCCC GATCTGATCG ACGGGCCGCT GCACGCCGAG
CTGATCGCCG GCGGCCGCTC CAACCTGACG TACCTGCTCT CTGCCGGGGA ACGGGAGATC
GTGCTGCGGC GGCCGCCGCT GGGCCACGTG CTGGCCACCG CACACGACAT GGCGCGGGAG
TTCCGGGTCA TCTCGGCGCT CGCCCCGACC GAGGTGCCGG TGCCGACAGC GCTGCTGCTC
TGCACCGACC CGGAGGTGAT CGGGGCGCCG TTCTATCTGA TGGCCCGCGT GGACGGCACG
GTGTTCCGCT CCCGGGCGCA GACCGACCCC CTACCCGACG GACAGCGGCG GGAGCTGGCG
ATGGCGATGA TGGACACCCT TGCCGCGCTG CACACCGTGG ACCCGGCGAC GGTCGGCCTG
GCCGACTTCG GCCGTCCGCA GGGCTTTCTC GCCCGCCAGG TCCGCCGCTG GTCCGGGCAG
CTCGACGGCT CCCGGAGCCG GCCGTTGCCC GGCATCCACG AGCTACGCGA CCGGCTGGCC
AACACCGCTC CGGAGGGTTC CGGTACGGGA CGGATCGTGC ACGGTGACTA CCGACTGGAC
AACCTCCTCG CCACCGTTGA CCCGGTCGCC GTTCGGGCGG TGCTCGACTG GGAGATGGCC
ACCCTCGGCG ACCCGCTGGC CGACCTGGGC CTCCTTTTGA CCTACTGGGA TGCCATGGGC
GGTGACGCGG TCCCGAGCAA TCCCGTCGCC GACGGGCTGG GGCCCCGGGC CGGCTTCCCC
GCCGGCGCCG AGCTGATCGA GCGGTACGCC AGCCGCAGCG GAATCGATGT CGGCCCCCTG
GACTGGCATG TGGCCCTGGG GTGCTTCAAA CTCGCCGTGA TCTGCGAGGG CATCTACTAC
CGGCACCGCC AGGGGCAGAC CCTCGGCGAG GGCTTCGACC AGATCGGCGA GATGGTCGCA
CCACTGGTCG CGTACGGGCT GACCGCCGTC TCGAGGAGGA GCTGA
 
Protein sequence
MTEPAIDDCA PTPPGLDLDR LAGHLAAHRP DLIDGPLHAE LIAGGRSNLT YLLSAGEREI 
VLRRPPLGHV LATAHDMARE FRVISALAPT EVPVPTALLL CTDPEVIGAP FYLMARVDGT
VFRSRAQTDP LPDGQRRELA MAMMDTLAAL HTVDPATVGL ADFGRPQGFL ARQVRRWSGQ
LDGSRSRPLP GIHELRDRLA NTAPEGSGTG RIVHGDYRLD NLLATVDPVA VRAVLDWEMA
TLGDPLADLG LLLTYWDAMG GDAVPSNPVA DGLGPRAGFP AGAELIERYA SRSGIDVGPL
DWHVALGCFK LAVICEGIYY RHRQGQTLGE GFDQIGEMVA PLVAYGLTAV SRRS