Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1563 |
Symbol | |
ID | 5058016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 1776551 |
End bp | 1777615 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640473831 |
Product | aminoglycoside phosphotransferase |
Protein accession | YP_001158407 |
Protein GI | 145594110 |
COG category | [R] General function prediction only |
COG ID | [COG3173] Predicted aminoglycoside phosphotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.364356 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.663698 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAGC CGGCCATCGA CGACTGCGCC CCGACCCCGC CCGGTCTTGA CCTGGACCGG CTCGCCGGGC ACCTCGCCGC GCACCGGCCC GATCTGATCG ACGGGCCGCT GCACGCCGAG CTGATCGCCG GCGGCCGCTC CAACCTGACG TACCTGCTCT CTGCCGGGGA ACGGGAGATC GTGCTGCGGC GGCCGCCGCT GGGCCACGTG CTGGCCACCG CACACGACAT GGCGCGGGAG TTCCGGGTCA TCTCGGCGCT CGCCCCGACC GAGGTGCCGG TGCCGACAGC GCTGCTGCTC TGCACCGACC CGGAGGTGAT CGGGGCGCCG TTCTATCTGA TGGCCCGCGT GGACGGCACG GTGTTCCGCT CCCGGGCGCA GACCGACCCC CTACCCGACG GACAGCGGCG GGAGCTGGCG ATGGCGATGA TGGACACCCT TGCCGCGCTG CACACCGTGG ACCCGGCGAC GGTCGGCCTG GCCGACTTCG GCCGTCCGCA GGGCTTTCTC GCCCGCCAGG TCCGCCGCTG GTCCGGGCAG CTCGACGGCT CCCGGAGCCG GCCGTTGCCC GGCATCCACG AGCTACGCGA CCGGCTGGCC AACACCGCTC CGGAGGGTTC CGGTACGGGA CGGATCGTGC ACGGTGACTA CCGACTGGAC AACCTCCTCG CCACCGTTGA CCCGGTCGCC GTTCGGGCGG TGCTCGACTG GGAGATGGCC ACCCTCGGCG ACCCGCTGGC CGACCTGGGC CTCCTTTTGA CCTACTGGGA TGCCATGGGC GGTGACGCGG TCCCGAGCAA TCCCGTCGCC GACGGGCTGG GGCCCCGGGC CGGCTTCCCC GCCGGCGCCG AGCTGATCGA GCGGTACGCC AGCCGCAGCG GAATCGATGT CGGCCCCCTG GACTGGCATG TGGCCCTGGG GTGCTTCAAA CTCGCCGTGA TCTGCGAGGG CATCTACTAC CGGCACCGCC AGGGGCAGAC CCTCGGCGAG GGCTTCGACC AGATCGGCGA GATGGTCGCA CCACTGGTCG CGTACGGGCT GACCGCCGTC TCGAGGAGGA GCTGA
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Protein sequence | MTEPAIDDCA PTPPGLDLDR LAGHLAAHRP DLIDGPLHAE LIAGGRSNLT YLLSAGEREI VLRRPPLGHV LATAHDMARE FRVISALAPT EVPVPTALLL CTDPEVIGAP FYLMARVDGT VFRSRAQTDP LPDGQRRELA MAMMDTLAAL HTVDPATVGL ADFGRPQGFL ARQVRRWSGQ LDGSRSRPLP GIHELRDRLA NTAPEGSGTG RIVHGDYRLD NLLATVDPVA VRAVLDWEMA TLGDPLADLG LLLTYWDAMG GDAVPSNPVA DGLGPRAGFP AGAELIERYA SRSGIDVGPL DWHVALGCFK LAVICEGIYY RHRQGQTLGE GFDQIGEMVA PLVAYGLTAV SRRS
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