Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1560 |
Symbol | |
ID | 5058013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 1772680 |
End bp | 1774116 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640473828 |
Product | glycoside hydrolase family protein |
Protein accession | YP_001158404 |
Protein GI | 145594107 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2723] Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase |
TIGRFAM ID | [TIGR03356] beta-galactosidase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.677245 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTAATC CCGCGAGCCC ACCCGCCGTG GGCGTTCTCG CCGAACGCCC GCCACTGGCC TTCCCGCCCG GCTTCCTCTG GGGCGCCGCC ACCGCGGCCT ACCAGATCGA GGGCGCGGCG ACCGCCGGCG GTCGGACGCC GTCGATCTGG GACACCTTCA GCCACACCCC GGGCCGGGTG GTGGCCGGGC ACACCGGTGA CGTGGCGTGC GACCACTACC ACCGCCTCGA CTCAGACGTC GCCCTCATGG CCGAGTTGGG GCTGAGGTCG TACCGGTTCT CGGTCTCCTG GCCTCGGGTG CAGCCCGGCG GAACCGGCCC GATCAACCAG GAGGGACTCG ACTTCTACCG GCGGCTGGTG GACCAGCTGC TGGCGAACGG CATCGAGCCG TGGCTGACTC TCTACCACTG GGACCTGCCG CAGCCGCTGG AGGACGCGGG CGGCTGGCCG GCCCGGGACA CCGCCGCCCG GTTCGCCGAC TACGCCGCCC TGGTCGCCGG CGCGCTCGGC GACCGGGTGC GGTACTGGAC CACCCTCAAC GAGCCGTGGT GCTCGGCGTT TCTCGGGTAC GGTTCCGGGG CGCACGCCCC GGGTCGGTCC GACCCCGCCG CCGCGGTCCG GGCCGGTCAC CACCTGCTGC TCGGTCACGG GCTGGCCGTG CCGGCGCTGC GGGCGGCCGC CCAGTCCGAG GTTGAGATCG GGGTGACCCT CAACCTGTAC CCGGTGACCC CGGCCACCGA TTCGCCCGGC GACGCCGACG CGGCACGCCG AATCGACGGG CTGGCGAACC GGTTCTTCCT CGACCCACTG CTGCGCGGGT CATACCCGGC GGATCTGATG TCCGATCTCA GGCAGGTCAG CGACTTCGGG CACGTGCGTG CGGGGGACCT GGCCACCATC GCCGCCCCGC TGGATCTGGT CGGGATCAAC TACTACAGCC GGCACGTGGT CGCCGCGCCG ACGGCGGCGG CCCCGCCGGA GCCGTACTGG CGCACACCCT CGTGCTGGCC GGGTAGCGAA GACGTTCGAT TTGTCGCCCG GGGCATGCCG GTCACCGACA TGGACTGGGA GATCGATCCT TCCGGCCTGG TCGAGACGTT GCAGCGGGTG TACGAGGAGT ACACCGACCT GCCGCTCTAC GTCACCGAGA ACGGTTCGGC CTTCGTAGAC GCGGTCGTTG ACGGGAAGGT GGACGACCCG GACCGCGTCG CCTACTTCGA GGCGCACCTA CGCGCCGCAC ACCAGGCGAT CGCCGCGGGT GTTCCGCTGC GCGGCTACTT CGCCTGGTCG TTGATGGATA ACTTCGAGTG GGCCTGGGGC TACACGAAGC GGTTCGGCAT GATCCACGTC GACTACCGCA GTCAGGCCCG CACCCTGAAA TCCAGCGGTC GGTGGTACGC CGAGACCATC CGACGTAACG GTCTGGCCGC ACAATAG
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Protein sequence | MSNPASPPAV GVLAERPPLA FPPGFLWGAA TAAYQIEGAA TAGGRTPSIW DTFSHTPGRV VAGHTGDVAC DHYHRLDSDV ALMAELGLRS YRFSVSWPRV QPGGTGPINQ EGLDFYRRLV DQLLANGIEP WLTLYHWDLP QPLEDAGGWP ARDTAARFAD YAALVAGALG DRVRYWTTLN EPWCSAFLGY GSGAHAPGRS DPAAAVRAGH HLLLGHGLAV PALRAAAQSE VEIGVTLNLY PVTPATDSPG DADAARRIDG LANRFFLDPL LRGSYPADLM SDLRQVSDFG HVRAGDLATI AAPLDLVGIN YYSRHVVAAP TAAAPPEPYW RTPSCWPGSE DVRFVARGMP VTDMDWEIDP SGLVETLQRV YEEYTDLPLY VTENGSAFVD AVVDGKVDDP DRVAYFEAHL RAAHQAIAAG VPLRGYFAWS LMDNFEWAWG YTKRFGMIHV DYRSQARTLK SSGRWYAETI RRNGLAAQ
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