| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1533 |
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| Symbol | |
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| ID | 5057986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 1744466 |
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| End bp | 1745875 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640473801 |
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| Product | protoporphyrinogen oxidase |
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| Protein accession | YP_001158377 |
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| Protein GI | 145594080 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1232] Protoporphyrinogen oxidase |
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| TIGRFAM ID | [TIGR00562] protoporphyrinogen oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACAC CATGGCGGAT CGCGGTGGTC GGAGGTGGGA TCGCCGGCCT CGCCGCCGCC
GTCCAGCTGA GGGACCACGC TCCCGCCGGC ACCGAGCTGA CGGTCTACGA GCGAAGCGAG
TCCCTCGGCG GCAAGCTGCA CACCGGTGAG CTGGCCGGTG CTCCGGTGGA GTTCGGCGCG
GAAGCGTTCC TGATGCGTGA CCCCGCCGGT GGGGAATCGG CCGCGGTAGC CCTGATCCGC
CGGCTCGGGC TGGCCGACAA CATCGTCCAC CCCACTGTCG GGCAGGCCGC GCTCCTGGTC
GACAACGAGC TGCGCCCGCT GCCCCGGGGC ACGCTGATCG GCGTACCCGG GGACCTCGCG
GCGGTGGCGG CGGTGGCCCG CCCGACCCCG GAGGCCGATG TGGACACCGG CCGGCCGCTG
CTCGCCCCCG GCGCCGACGT CACGGTCGGC GAACTGGTCC GGGGCCGGCT GGGTGACGAG
ATCGTCGACC GGTTGGTGGA GCCGATGCTT GGTGGTGTGT ACGCCGGCCG TGCCAACGAC
CTCTCCCTGG CCGCCACCAT GCCCGCGCTG ACCCGGACCG CCCGGGTCGA ACACACCCTG
GTCGGCGCGG TCCGCGCGGC GCAGGCGGCG GCGCCGCGGG CGCCCGGTAC GCCGTTCTTC
GGCACGTTGG TCGGTGGCCT CAGCACCCTG GTCGAGGCCG CCGCGTCAAC CAGCGGCGCC
ACGATCCGGC GGAACGCGAC GGTCCGGGCG CTGACCCCGG CGGGCTCCGG CTGGCACCTG
ACCGTTGGCC CGAACGGCGA CGCGGAGCAC GTCCATGCCG ACGCCGTGGT GCTGGCCGTA
CCGGCCCGGC CGGCGGGGCG GCTGCTCGCC GATGTCGCCC CGGTAGCGGC CGAGAGCGTC
GGTGAGCTGG CCTACGCCAG CGTCGCGTTG GTCACCCTCG CGTTGCCGGC GACGGAACTG
CCCGCGCTCT CCGGCTTCCT GGTGCCGACC GGCGAGGGGC TGCTGATGAA GGCGTCCACC
TTCTTCACCA CCAAGTGGGG GCACCTGCGC CGGCCCGACG GGTTGACCCT GGTCCGCGCC
TCGGTCGGCC GGTACGGGGA CGAGGCACAG CTCCAGCGCC CCGACTCCGA CCTCGTTGAC
ACCGTGCACC GGGAGCTGTC GGCGGTGTGT GGTGCCGCGC TTCCCACCCC GCTCGCCACG
CACGTGCAGC GCTGGGGCGG GTCGCTGCCG CAGTACGCGC CGGGCCACCT GGACCGGGTG
GCGTCGGCGC GGGCGGTGCT ACGGGCGCAG CGGCCAACCC TGGCGCTGGC GGGAGCTGGC
TACGACGGCG TCGGAATTCC GGTCTGTATC CGGTCCGGCG CGGCGGCGGC CGATGAGATC
ATCACTGCAC TGAAGGGTTC CGGGATATGA
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| Protein sequence | MATPWRIAVV GGGIAGLAAA VQLRDHAPAG TELTVYERSE SLGGKLHTGE LAGAPVEFGA
EAFLMRDPAG GESAAVALIR RLGLADNIVH PTVGQAALLV DNELRPLPRG TLIGVPGDLA
AVAAVARPTP EADVDTGRPL LAPGADVTVG ELVRGRLGDE IVDRLVEPML GGVYAGRAND
LSLAATMPAL TRTARVEHTL VGAVRAAQAA APRAPGTPFF GTLVGGLSTL VEAAASTSGA
TIRRNATVRA LTPAGSGWHL TVGPNGDAEH VHADAVVLAV PARPAGRLLA DVAPVAAESV
GELAYASVAL VTLALPATEL PALSGFLVPT GEGLLMKAST FFTTKWGHLR RPDGLTLVRA
SVGRYGDEAQ LQRPDSDLVD TVHRELSAVC GAALPTPLAT HVQRWGGSLP QYAPGHLDRV
ASARAVLRAQ RPTLALAGAG YDGVGIPVCI RSGAAAADEI ITALKGSGI
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