| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1528 |
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| Symbol | |
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| ID | 5057981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 1738939 |
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| End bp | 1740294 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640473796 |
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| Product | 3'-5' exonuclease |
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| Protein accession | YP_001158372 |
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| Protein GI | 145594075 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0349] Ribonuclease D |
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| TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.104904 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.219047 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGACG AACCACCCCT ACCCCGTCGG GCTGCCGCAA ACCGTACGGG CGACACGCCG
CACCCGCCGT TGATCCGGCC GGGGAACACG GACGTTGACC CGACCGCTGG TGGCCCAGCT
ACCGCCCCGC GCGACGCCGA GACCGGCCCC ACCCCGCTGA CGGCGCCCGG CGAGGGCACC
CCCCAGCCGG TGACCACCCC GGTGGAACTG GCCGAGGTCG TGGCCCGCTT CTCCCAGGGC
ACCGGTCCGG TGGCGCTGGA CGCCGAACGC GCCTCTGGCT ACCGGTACAG CCAACGGGCG
TACCTGGTGC AGCTGCGCCG CGCCGGCGCC GGTACCGCCC TGATCGACCC GCTGCCCCTG
CCGGAGCTGA CCAGCCTGGA CGAGGCCATC GGCGAGGCGG AGTGGGTGCT CCACGCGGCC
AGTCAGGATC TGTACTGCCT AGCCGAGTTG GGTCTGCGCC CACGGCGGCT CTTCGACACC
GAGTTGGCCG CCCGACTCGC CGGCTTCGAG CGGGTCGGCC TCGCCGCGTT GACCGAAAAC
CTGCTCGGCT TCAGCCTGGA GAAGCACCAT TCGGCGGCGG ACTGGTCGAG CCGGCCGCTG
CCGGAATCCT GGCTGACCTA CGCCGCCCTG GACGTGGAGC TACTGGTCGA GTTACGGGAC
GCGCTCGATG CCGAACTGAC CCGGCAGGGC AAGGCCGAAT GGGCGGCCGA GGAGTTCGCC
GCGCTGGTCC GCAACGGTGC CCGCCCACCC CGGGTCCGCG CCGAGCCCTG GCGCCGCACC
TCGGGCATCC ACCGGGTACG CGGGGCGCGG GCGCAGGCCC GGGTGCGGTC CCTGTGGTAC
GCCCGGGACC AGATCGCGGC GCGCCGCGAC GCCGCGCCGG GACGGGTGTT GCCGGACTCG
GCGATCGTCG CCGCCGCCGA ACTGGATCCG CGGGACGAGA AGACGCTGCT GACTCTGCCG
GGTTTCGGCG GTCGCTCGGT ACGCCGGCTG ACCCGTACCT GGTTGGCCGC ACTGGACGAG
GCTCGAGCGT TGCCAGCGGA GGCGCTGCCG GTCGCGCCGA CCGTCGAGGG TCCGCCGCCG
CCGCATCGGT GGGCCGAGCG GGATCCGGTC GCCGCGGCCC GGTTGGCGCG GTGCCGGGAG
GTGGTCGTCG GGACCGCCGG CGCGCACACC CTGCCACCGG AGAACCTGAT CGCCCCGGAC
TCGATCCGCC GCCTCGCCTG GGTCCCGCCC GAGGAGATCA CCGACGGCAC GGTGGCGGAG
ACCCTGCGCG GCCTGGGTGC ACGTGAGTGG CAGATCGCGC TGCTTCAGCC AGACCTGACA
CGGGCCCTGG CGGGCCCACC GCCAACGGGA ACCTGA
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| Protein sequence | MTDEPPLPRR AAANRTGDTP HPPLIRPGNT DVDPTAGGPA TAPRDAETGP TPLTAPGEGT
PQPVTTPVEL AEVVARFSQG TGPVALDAER ASGYRYSQRA YLVQLRRAGA GTALIDPLPL
PELTSLDEAI GEAEWVLHAA SQDLYCLAEL GLRPRRLFDT ELAARLAGFE RVGLAALTEN
LLGFSLEKHH SAADWSSRPL PESWLTYAAL DVELLVELRD ALDAELTRQG KAEWAAEEFA
ALVRNGARPP RVRAEPWRRT SGIHRVRGAR AQARVRSLWY ARDQIAARRD AAPGRVLPDS
AIVAAAELDP RDEKTLLTLP GFGGRSVRRL TRTWLAALDE ARALPAEALP VAPTVEGPPP
PHRWAERDPV AAARLARCRE VVVGTAGAHT LPPENLIAPD SIRRLAWVPP EEITDGTVAE
TLRGLGAREW QIALLQPDLT RALAGPPPTG T
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