| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1526 |
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| Symbol | |
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| ID | 5057979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 1735517 |
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| End bp | 1737583 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640473794 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase, NAD-binding |
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| Protein accession | YP_001158370 |
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| Protein GI | 145594073 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00910014 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.16396 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCCTCG CGGCACCGAA CGAGGTCGTC ACCAAGGCAC TGCTGCGCCT GGTGAACGTA
CCGGGACTGG ACCGCCCCGC CGCCCTGATC ACCCTGGACA ACGGCTTCGA CCACACCAAG
CCGAACACTC TTGGGCCGGG TGGCCTGACC AGCCTGGACG AGGCGATCAC GGCGGCCCAC
GCGGCGCAGC CGGCGTTCGT CGCGGTGACC GGTAAGCCCT ACATCTTCTG CGTCGGAGCG
GATCTCACCG GTCTGCCGTT GCTCACCGAC CGCGCGCAGG CGCTGGAGAT CGGACAGCTC
GGCCACCGGG TCTTCGCCCG GCTCAAGGAC AGCGCCGTTC CGACCTTCGC CTTCGTCAAC
GGCGCGGCCA TGGGCGGCGG CCTGGAGTTG GCCCTGCACT GCCACTACCG GACGCTGTCG
GCGGGTGCAG CGGCCCTCGC CCTACCGGAG GTCTCGCTCG GTATCGTCCC GGGCTGGGGC
GGCACCCAGC TGCTGCCGAA CCTGGTCGGC ATCCCGGCGG CGACCCAGGT GATCATCCAG
AACCCGCTGA TGCAGAACAA GATGCTCAAG CCGAAGCAGG CGGCGGAGAT GGGCCTCGCG
GATGTCCTGC TGGAGCCGGC GGACTTCCTG GAGCGGTCCC TGGAGTGGGC GGCAGGCGTG
GTCCGCGGCG AGCTCACCGT GACCCGGCCC GAGGTCGACC GGGAGATGTG GGACGGCGTC
CTCTTCTTCG CCAAGCAGAC CCTGGATGCC CGCCTACACG GCGCCGTCCC GTCCGCCAAC
AGGGCCCTCG ACCTGCTCGG CCTGGCCAAG GAGACGGACT TCGCCGCCGG CACCGCCGCC
GAGGACGAGG CCCTGGCCGA CCTGATCTTC TCGTCGGAGC TGCGCAGCGG GCTCTACGCG
TTCGACCTGG TGCAGCGGCG GGCCAAGCGT CCAGCCGGGG CGCCGGACCG GGACCTGGCC
CGGCCGGTGA CCAAGGTCGG CATCGTCGGC GCCGGCCTGA TGGCCAGCCA GCTCGCGCTA
CTGTTCGCCC GCCGCCTTCA GGTCCCGGTC GTTCTGACCG ATCTGGACCA GGCCCGGGTC
GACAAGGGCG TGGCCTACGT GCACGAGCAG ATCGAGAAGT CGGTCAGCAA GGGCCGGATG
GACAAGGGCA CCGCCGCCAA GCTGTACGGC CTGGTGAGCG GGTCGGTCGA CAAGTCCGTC
TTCACCGATG CGGACTTCGT CATCGAGGCC GTCTTCGAGG ACCTCAACGT CAAGAAGCAG
GTCTGGGCCG AGTTGGAGAA GATCGTCAAG CCCGAGGCGA TGCTGGCCAC CAACACGTCG
TCGCTGTCGG TGACGGCGAT GGCCGAAGGG CTCGAGCACC CGGAGCGGGT GGTCGGCTTC
CACTTCTTCA ACCCGGTCGC CGTCCTCCCG CTGCTGGAGA TCGTCCGCGG TGAGCGGACC
GACGACGCCA CGTTGGCCAC CGCGTTCGCG GTCGGTAAGC AGCTGAAAAA GTCGAGCGTG
CTGGTGAAGG ACGCGCCCGC GTTCGTGGTC AACCGGCTGC TGACCCGTTT CCTGGGCACG
GTGTTCGCCG CGGTGGACGC CGGTACCCCG CTGGAGGTGG CGAACAACGC GCTCGATCCG
CTGGGCCTAC CGATGCGCCC ACTGGCGCTG CTCCAGCTGG TCGGGCCGGC GGTCGCGCAC
CATGTCAGCG GCATCCTGCA CGCGGCGTTC CCGGACCGGT TCGGCGTCAG CGAGAACCTC
AAGCGGATCG CCGAGGCCGG CAAGCCGATC GTCGTCGACG ACGAGATCAA CACCGAGGTG
GCCAACCTGC TGGTGGTCGG CGACCAGCCG CTCACCGCCG AGCAGGTCCG GCAGAACGCG
CTCGACGCGC TGGCGCAGGA GATCCGGCTG ATGCTCGACG AGGGCGTGGT CGCCGAGGCG
CAGGACATCG ACCTGTGCCT GATCCTGGGC GCCGGTTGGC CGTTCCACCT GGGCGGCGTC
ACGCCGTACC TGGATCGCAC CGGCACCGCC GAACGGGTCG CGGGCAAGCG ATTCCTGCCG
GTCGGCGTCG CCAGCCTCCC GGCCTGA
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| Protein sequence | MSLAAPNEVV TKALLRLVNV PGLDRPAALI TLDNGFDHTK PNTLGPGGLT SLDEAITAAH
AAQPAFVAVT GKPYIFCVGA DLTGLPLLTD RAQALEIGQL GHRVFARLKD SAVPTFAFVN
GAAMGGGLEL ALHCHYRTLS AGAAALALPE VSLGIVPGWG GTQLLPNLVG IPAATQVIIQ
NPLMQNKMLK PKQAAEMGLA DVLLEPADFL ERSLEWAAGV VRGELTVTRP EVDREMWDGV
LFFAKQTLDA RLHGAVPSAN RALDLLGLAK ETDFAAGTAA EDEALADLIF SSELRSGLYA
FDLVQRRAKR PAGAPDRDLA RPVTKVGIVG AGLMASQLAL LFARRLQVPV VLTDLDQARV
DKGVAYVHEQ IEKSVSKGRM DKGTAAKLYG LVSGSVDKSV FTDADFVIEA VFEDLNVKKQ
VWAELEKIVK PEAMLATNTS SLSVTAMAEG LEHPERVVGF HFFNPVAVLP LLEIVRGERT
DDATLATAFA VGKQLKKSSV LVKDAPAFVV NRLLTRFLGT VFAAVDAGTP LEVANNALDP
LGLPMRPLAL LQLVGPAVAH HVSGILHAAF PDRFGVSENL KRIAEAGKPI VVDDEINTEV
ANLLVVGDQP LTAEQVRQNA LDALAQEIRL MLDEGVVAEA QDIDLCLILG AGWPFHLGGV
TPYLDRTGTA ERVAGKRFLP VGVASLPA
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