| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1518 |
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| Symbol | |
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| ID | 5057971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 1726760 |
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| End bp | 1727596 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640473786 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001158362 |
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| Protein GI | 145594065 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.606963 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.022428 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCGA GCCCGACTGT CCGTCGTCGA CGTTTGGCCG CTGCACTGCG CCGCCTTCGC
GAGCAGACGG GCATGACCGC CGACCAGGCC GCCAAAGAGG TTGGCATCTC GAAGTCCGCG
CTCAGCCGGA TCGAGAACGC CCAGGTCTCG GTGATGCCGC CGGTCGCCCG TGGCCTCCTT
GAGCTGTACG GCGTCGAGGG CGAGGAGATT GACGCGCTCG TCCAGATCGC GCGGGACGCC
CGCAAGCGCG GCTGGTGGCA GGCGTACGAC GATGTGCTGC CGGACTGGTT CGGGGTCTAC
GTCGGGCTGG AAGCCGAAGC GTCGGAGGTC CGCGCCTTCG AGCCGCAGCT GATTCCCGGG
CTACTCCAGA CCGCCGACTA CGCCCGCGCC GTCATCCGTG CGGAACACCC GGACTCCTCC
AACGAGGAGG TGGACCGTCG GGTGGAGTTG CGGATGCGCC GCCAGGAGTC CAACAATTCG
CCGAAGCTCT GGGTGGTGCT GGACGAGGCG ACGCTACGGC GACCTGTCGG TGGCGTCGAC
ACCTTCCGCG CCCAGCTACG GAGACTGATC GAGGAGTCAG ACCGACCCGG CAACACCGTG
CAAATCTTGA CCTTCGGTGC CGGCGAATAC GGTTCGATGG GCAGCGCGTT CAGCGTGCTG
AGCTTCCCGG AGTTAGCGGA CTCGGGGGTC GTCTACGTCG AAACGCGAGC GGGTAGCCTC
TATCTCGAAG GCCATCAGGT CAGGGAGTAT AGCCGGGTCT TCGAGCACCT GGTCGCCACG
GCAGCCAGCG CTCGTGAGTC CCGCGACCTG ATCCAGGAGG CGATCGACGA GCGGTGA
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| Protein sequence | MTASPTVRRR RLAAALRRLR EQTGMTADQA AKEVGISKSA LSRIENAQVS VMPPVARGLL
ELYGVEGEEI DALVQIARDA RKRGWWQAYD DVLPDWFGVY VGLEAEASEV RAFEPQLIPG
LLQTADYARA VIRAEHPDSS NEEVDRRVEL RMRRQESNNS PKLWVVLDEA TLRRPVGGVD
TFRAQLRRLI EESDRPGNTV QILTFGAGEY GSMGSAFSVL SFPELADSGV VYVETRAGSL
YLEGHQVREY SRVFEHLVAT AASARESRDL IQEAIDER
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