Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1500 |
Symbol | |
ID | 5057953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 1712871 |
End bp | 1713377 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640473768 |
Product | hypothetical protein |
Protein accession | YP_001158344 |
Protein GI | 145594047 |
COG category | [S] Function unknown |
COG ID | [COG1683] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.100899 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.408779 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTGACAA TCCTGGTCAG CGGCTGCCTG GGCGGCGCAC CGCTCCGGTT CAACGAGACC GGCGTGCCGG TCTCCTCTCC GATCTGGCAG CGCTGGGCTT CTGAAGGACG CCTCGTGTCG CTGTGTCCAG AACTGGCCGT CGGATTCCCG GTGCCCCGCC CGCCAGCTGA GATCGTCGGC GGCAGCGCAG CCGACGTCCT CGACGGCCGC GCCCAAGTAC ACGAAGCATC GGGCCGTGAC GTCACCGAAC TGTTCCAGGC GGCGGCGCAG CACGCGGTCG ACAAGGCACT GCAGGCCGGA GTCGGCCTCG CCATCCTGGT CGACGGCAGC CCTACCTGCG GTAGCACCTA CGTTCACGAC GGAACCTTCA CCGGCGTCAC CGTCGCTGGG CGTGGCGTCG CGGCCGAGGC GTTGCGCCGC CGGGGTATTC CTGTGTTTCC TCACTACGAC CTGGACAGGG CAGCGGCTGC TCTGGCGGAG AAGGAACGGC AGCACGGCAA CGGCTGA
|
Protein sequence | MLTILVSGCL GGAPLRFNET GVPVSSPIWQ RWASEGRLVS LCPELAVGFP VPRPPAEIVG GSAADVLDGR AQVHEASGRD VTELFQAAAQ HAVDKALQAG VGLAILVDGS PTCGSTYVHD GTFTGVTVAG RGVAAEALRR RGIPVFPHYD LDRAAAALAE KERQHGNG
|
| |