Gene Strop_1500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1500 
Symbol 
ID5057953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1712871 
End bp1713377 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content69% 
IMG OID640473768 
Producthypothetical protein 
Protein accessionYP_001158344 
Protein GI145594047 
COG category[S] Function unknown 
COG ID[COG1683] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.100899 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.408779 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGACAA TCCTGGTCAG CGGCTGCCTG GGCGGCGCAC CGCTCCGGTT CAACGAGACC 
GGCGTGCCGG TCTCCTCTCC GATCTGGCAG CGCTGGGCTT CTGAAGGACG CCTCGTGTCG
CTGTGTCCAG AACTGGCCGT CGGATTCCCG GTGCCCCGCC CGCCAGCTGA GATCGTCGGC
GGCAGCGCAG CCGACGTCCT CGACGGCCGC GCCCAAGTAC ACGAAGCATC GGGCCGTGAC
GTCACCGAAC TGTTCCAGGC GGCGGCGCAG CACGCGGTCG ACAAGGCACT GCAGGCCGGA
GTCGGCCTCG CCATCCTGGT CGACGGCAGC CCTACCTGCG GTAGCACCTA CGTTCACGAC
GGAACCTTCA CCGGCGTCAC CGTCGCTGGG CGTGGCGTCG CGGCCGAGGC GTTGCGCCGC
CGGGGTATTC CTGTGTTTCC TCACTACGAC CTGGACAGGG CAGCGGCTGC TCTGGCGGAG
AAGGAACGGC AGCACGGCAA CGGCTGA
 
Protein sequence
MLTILVSGCL GGAPLRFNET GVPVSSPIWQ RWASEGRLVS LCPELAVGFP VPRPPAEIVG 
GSAADVLDGR AQVHEASGRD VTELFQAAAQ HAVDKALQAG VGLAILVDGS PTCGSTYVHD
GTFTGVTVAG RGVAAEALRR RGIPVFPHYD LDRAAAALAE KERQHGNG