Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1492 |
Symbol | |
ID | 5057945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 1702965 |
End bp | 1704692 |
Gene Length | 1728 bp |
Protein Length | 575 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640473760 |
Product | major facilitator transporter |
Protein accession | YP_001158336 |
Protein GI | 145594039 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.926089 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.297712 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGCTC AGGAACCGCA GCGGGCGGGG CGGCGAGAGT GGTGGGGTCT TGCTGCCCTG GCCCTGCCGA CGCTGTTGGT GGCGATGGAC CTCACGGTGC TGCATCTGGC GGTGCCGGCG CTCAGTGAAG CGTTCAAGCC GAGCAGTTCG GAACTGCTCT GGATCACGGA CATCTACGGC TTCCTCATCG CCGGCTTCCT GATCACGATG GGGTCGCTCG GCGACCGGAT CGGCCGACGT CGGCTGTTGT TGATCGGCGC GTTCGGGTTC GGCGTCGCGT CGTTGCTGGC GGCTTTCTCC ACCACACCGG AGATGCTGAT CCTCACCCGG GCGCTGCTCG GCGTCGCCGG GGCCACGCTG ATGCCCTCGA CGCTGGCGTT GATCCGCAGC ATGTTTCAGA GCCCGGCGCA GCGGCCGATG GCGATCGGTG TCTGGATGAC CAGCTTTGTC ACCGGGACCG CCATCGGACC GCTGGTCGGT GGGGTTCTCC TTGGGTCCTA CTGGTGGGGG TCGGTGTTCC TTCTCGGCGT GCCGGTGATG GTGCTGTTGT TGATCATTGG TCCGATGCTG CTTCCAGAGG AGGCGGATCC TGATGCTGGC CGCCCGGACC TGCACAGCGC TCTCCTCTCG CTGGTCACCA TTCTGGCCGT AGTGTTCGGC TTCAAGCAGT TCGCCGGGGG GTCCAGCGGT CCGCTGCCGT GGACGTGCGT GGCCCTGGGC GCCGGTCTCG GCTGGATCTT TGTTCGTCGG CAGAGGCTTT TGCGGGACCC CCTGCTCGAC CTGGCGCTAT TCACCCGCCG TACGTTCGGG GTGGCCGTCG CCACGCAGAC CCTGACGGTC TTTGCGATGG CGGGCGTGCA GTTCTTCGCG GGCCAGTACC TTCAGCTCGT CCTCGGCATG TCCCCGCTGC GAGCCGGACT CTGGTCCCTG CCGTGGACGC TCATGGGCGT CGCCGGGGCG ATGCTGGCGC CGTTTGTCGT CCGCCGTCTG TCGCGGTCGA CAGTGATGGC GGGCGGCCTG GCGCTCGGCG CTGCGGGGTT CGGCGCTCTG GCCGGCATCG ACTCGACTAC CGGACTCACC TTGCTGGTGG TCAGCATGGT CATCGCATCC CTCGGAATCT CCGGCACGAT GACCCTGAGC ACGGACCTAG CCGTCGGGGC GGCTCCTGAG GAACGCGCCG GGTCGGCGTC GGCTATCTCC GAGACCGGAA GCGAACTCGG CCTCGCCCTG GGCATCGCGG TACTGGGCAG TGTCGGCAGC GTCGTCTATC GCCAGGAACT GGCCAGGTCC GCGCCCGTGT CAACCCTGCC CGAGTCGATG GAGGTCGCCA CCGACACGCT GGGCGGGGCG GTCAGCGTGG CAAACGAGCT GCCCGGCGAG GCTAGAGACG CACTACTCGC CTCTGCCCGG GAGGCGTTCA CCACCGGGAT GGCGGTGACA TCGGCGATCA GCAGTGCGGT GCTGATCGCC CTGGCGATCG CCGTCGGCAT CCTGCTGCGC ACCGTGGTCC ATCGACGAGT CCGGCCTCCT GGACGAAGGC GCATGACCGC CGCGAATCAG CCCGGTCGGC CGGGACCGGC CGACCGGGCT CCGGCCTCAG GCCGTCGGCG CCGGTTCCAG CAACGCGCGA ACGTCCCATA CCCAGACGTC CAGTTCACGC TTGCCGGGGC CGACCAGTTG TTCGACGGTC AGCCGCAGCG GCTCCGCATG GTGCTGGTCC ACCGGTAG
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Protein sequence | MDAQEPQRAG RREWWGLAAL ALPTLLVAMD LTVLHLAVPA LSEAFKPSSS ELLWITDIYG FLIAGFLITM GSLGDRIGRR RLLLIGAFGF GVASLLAAFS TTPEMLILTR ALLGVAGATL MPSTLALIRS MFQSPAQRPM AIGVWMTSFV TGTAIGPLVG GVLLGSYWWG SVFLLGVPVM VLLLIIGPML LPEEADPDAG RPDLHSALLS LVTILAVVFG FKQFAGGSSG PLPWTCVALG AGLGWIFVRR QRLLRDPLLD LALFTRRTFG VAVATQTLTV FAMAGVQFFA GQYLQLVLGM SPLRAGLWSL PWTLMGVAGA MLAPFVVRRL SRSTVMAGGL ALGAAGFGAL AGIDSTTGLT LLVVSMVIAS LGISGTMTLS TDLAVGAAPE ERAGSASAIS ETGSELGLAL GIAVLGSVGS VVYRQELARS APVSTLPESM EVATDTLGGA VSVANELPGE ARDALLASAR EAFTTGMAVT SAISSAVLIA LAIAVGILLR TVVHRRVRPP GRRRMTAANQ PGRPGPADRA PASGRRRRFQ QRANVPYPDV QFTLAGADQL FDGQPQRLRM VLVHR
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