| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1492 |
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| Symbol | |
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| ID | 5057945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 1702965 |
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| End bp | 1704692 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640473760 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001158336 |
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| Protein GI | 145594039 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.926089 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.297712 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGCTC AGGAACCGCA GCGGGCGGGG CGGCGAGAGT GGTGGGGTCT TGCTGCCCTG
GCCCTGCCGA CGCTGTTGGT GGCGATGGAC CTCACGGTGC TGCATCTGGC GGTGCCGGCG
CTCAGTGAAG CGTTCAAGCC GAGCAGTTCG GAACTGCTCT GGATCACGGA CATCTACGGC
TTCCTCATCG CCGGCTTCCT GATCACGATG GGGTCGCTCG GCGACCGGAT CGGCCGACGT
CGGCTGTTGT TGATCGGCGC GTTCGGGTTC GGCGTCGCGT CGTTGCTGGC GGCTTTCTCC
ACCACACCGG AGATGCTGAT CCTCACCCGG GCGCTGCTCG GCGTCGCCGG GGCCACGCTG
ATGCCCTCGA CGCTGGCGTT GATCCGCAGC ATGTTTCAGA GCCCGGCGCA GCGGCCGATG
GCGATCGGTG TCTGGATGAC CAGCTTTGTC ACCGGGACCG CCATCGGACC GCTGGTCGGT
GGGGTTCTCC TTGGGTCCTA CTGGTGGGGG TCGGTGTTCC TTCTCGGCGT GCCGGTGATG
GTGCTGTTGT TGATCATTGG TCCGATGCTG CTTCCAGAGG AGGCGGATCC TGATGCTGGC
CGCCCGGACC TGCACAGCGC TCTCCTCTCG CTGGTCACCA TTCTGGCCGT AGTGTTCGGC
TTCAAGCAGT TCGCCGGGGG GTCCAGCGGT CCGCTGCCGT GGACGTGCGT GGCCCTGGGC
GCCGGTCTCG GCTGGATCTT TGTTCGTCGG CAGAGGCTTT TGCGGGACCC CCTGCTCGAC
CTGGCGCTAT TCACCCGCCG TACGTTCGGG GTGGCCGTCG CCACGCAGAC CCTGACGGTC
TTTGCGATGG CGGGCGTGCA GTTCTTCGCG GGCCAGTACC TTCAGCTCGT CCTCGGCATG
TCCCCGCTGC GAGCCGGACT CTGGTCCCTG CCGTGGACGC TCATGGGCGT CGCCGGGGCG
ATGCTGGCGC CGTTTGTCGT CCGCCGTCTG TCGCGGTCGA CAGTGATGGC GGGCGGCCTG
GCGCTCGGCG CTGCGGGGTT CGGCGCTCTG GCCGGCATCG ACTCGACTAC CGGACTCACC
TTGCTGGTGG TCAGCATGGT CATCGCATCC CTCGGAATCT CCGGCACGAT GACCCTGAGC
ACGGACCTAG CCGTCGGGGC GGCTCCTGAG GAACGCGCCG GGTCGGCGTC GGCTATCTCC
GAGACCGGAA GCGAACTCGG CCTCGCCCTG GGCATCGCGG TACTGGGCAG TGTCGGCAGC
GTCGTCTATC GCCAGGAACT GGCCAGGTCC GCGCCCGTGT CAACCCTGCC CGAGTCGATG
GAGGTCGCCA CCGACACGCT GGGCGGGGCG GTCAGCGTGG CAAACGAGCT GCCCGGCGAG
GCTAGAGACG CACTACTCGC CTCTGCCCGG GAGGCGTTCA CCACCGGGAT GGCGGTGACA
TCGGCGATCA GCAGTGCGGT GCTGATCGCC CTGGCGATCG CCGTCGGCAT CCTGCTGCGC
ACCGTGGTCC ATCGACGAGT CCGGCCTCCT GGACGAAGGC GCATGACCGC CGCGAATCAG
CCCGGTCGGC CGGGACCGGC CGACCGGGCT CCGGCCTCAG GCCGTCGGCG CCGGTTCCAG
CAACGCGCGA ACGTCCCATA CCCAGACGTC CAGTTCACGC TTGCCGGGGC CGACCAGTTG
TTCGACGGTC AGCCGCAGCG GCTCCGCATG GTGCTGGTCC ACCGGTAG
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| Protein sequence | MDAQEPQRAG RREWWGLAAL ALPTLLVAMD LTVLHLAVPA LSEAFKPSSS ELLWITDIYG
FLIAGFLITM GSLGDRIGRR RLLLIGAFGF GVASLLAAFS TTPEMLILTR ALLGVAGATL
MPSTLALIRS MFQSPAQRPM AIGVWMTSFV TGTAIGPLVG GVLLGSYWWG SVFLLGVPVM
VLLLIIGPML LPEEADPDAG RPDLHSALLS LVTILAVVFG FKQFAGGSSG PLPWTCVALG
AGLGWIFVRR QRLLRDPLLD LALFTRRTFG VAVATQTLTV FAMAGVQFFA GQYLQLVLGM
SPLRAGLWSL PWTLMGVAGA MLAPFVVRRL SRSTVMAGGL ALGAAGFGAL AGIDSTTGLT
LLVVSMVIAS LGISGTMTLS TDLAVGAAPE ERAGSASAIS ETGSELGLAL GIAVLGSVGS
VVYRQELARS APVSTLPESM EVATDTLGGA VSVANELPGE ARDALLASAR EAFTTGMAVT
SAISSAVLIA LAIAVGILLR TVVHRRVRPP GRRRMTAANQ PGRPGPADRA PASGRRRRFQ
QRANVPYPDV QFTLAGADQL FDGQPQRLRM VLVHR
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