Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1470 |
Symbol | |
ID | 5057923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 1680033 |
End bp | 1680929 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 640473738 |
Product | ribokinase-like domain-containing protein |
Protein accession | YP_001158314 |
Protein GI | 145594017 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACAC CCCGGGTGGT CGTCGTCGGC GACCTGATCA CCGACGTGGT GGCGGTGCTG GCCGGGCCGC TCATGAACGG TTCGGACACG CCGGCCGAGA TCCGGTTCAC CGGAGGCGGC CAGGCGGCGA ACACCGCGGC CTGGCTGGGC GCGTTGGGCG TGCCGGTGAC GCTGGTCGGT GCGGTGGGCG CCGACGGTCC CGGCCGGGAC CGGGTCGCCG AGTTGGAGCG CGGCGGGGTC GACTGTGCGG TCACCCAGGT GCCCGAGGTC CCCACCGGAA CGGTCTTGGT GCTGGCCACC GCCGAGGAAC GCACGATGGT CACCGAGCGG GGGGCGAACC TGCGGCTGTC CCCGGCGGCG GTGGACGCCG CTCTCGACGC CGCGCCGGAC GCCCGGCATC TCCACCTGTC CGGTTACACC CTGCTCGATG CCGGGTCCCG ACCGGCCGGG CTGCGCGCCC TGGCCGCGGC CCGCGAGCGG GGGCTGTCGA TCAGCGTGGA CGCGGCCTCC GCGGCGCCGC TACAACGGGT CGGCGCGGCG GCCTTCCTGG GCTGGGTACG CGGCATCGAC CTACTCCTGG TCAACGCGGC GGAGGCCCGA GTGCTCGCGG GCGGGCTCGA CCCGGCGGCG CAGGGGCGGG TGCTCTCCGC CTCGGCGCGG TGGGTGGTGG TCAAGCGGGG AGCGGCCGGC GCGGTCTGGG TGGACCGGGA CGCCATGATC GCGGTAGCCC CGACCCGCCG GATGTCGGTG GTCGATCCGA CCGGGGCCGG CGACGCGTTC GCCGCCGGCC TGCTCTCCAC CTGGCTGACC GGGGCGACCC CGGAGGCGGT GCTACAGCGG GCCGGTGACC TAGGCGCGTC GGCGGTTAGC CAGGTGGGGG CCCGACCACC GGCCTGA
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Protein sequence | MTTPRVVVVG DLITDVVAVL AGPLMNGSDT PAEIRFTGGG QAANTAAWLG ALGVPVTLVG AVGADGPGRD RVAELERGGV DCAVTQVPEV PTGTVLVLAT AEERTMVTER GANLRLSPAA VDAALDAAPD ARHLHLSGYT LLDAGSRPAG LRALAAARER GLSISVDAAS AAPLQRVGAA AFLGWVRGID LLLVNAAEAR VLAGGLDPAA QGRVLSASAR WVVVKRGAAG AVWVDRDAMI AVAPTRRMSV VDPTGAGDAF AAGLLSTWLT GATPEAVLQR AGDLGASAVS QVGARPPA
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