Gene Strop_1467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1467 
Symbol 
ID5057920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1677425 
End bp1677847 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content72% 
IMG OID640473735 
ProductD-tyrosyl-tRNA(Tyr) deacylase 
Protein accessionYP_001158311 
Protein GI145594014 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1490] D-Tyr-tRNAtyr deacylase 
TIGRFAM ID[TIGR00256] D-tyrosyl-tRNA(Tyr) deacylase 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.644689 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGCGG TGGTGCAGAC GGTCGGGCGG GCCCAGGTCA CAGTGGACGA CGTGGTGGTG 
GGGGCGATCG ACGACGGCCT GCTGGTGCTG CTCGGGGTGA CCCACTCCGA CACGACGCAG
ACCGCCCAAA CCCTCGCCCG CAAGGTGCAC GAGCTGCGAA TCCTCGACGG AGAGCGGTCG
GCCGCCGACC TCGGTGCCCC GATCCTGGTG GTCAGCCAGT TCACCCTCTA TGGGGACGCC
CGCAAGGGCC GCCGCCCGAG TTGGACCGCC GCCGCGCCGG CGGAGGTGGC CGAGCCCCTG
GTCACCACGG TCGTCGAGGA GCTGCGCGCC CGTGGGGCCA AAGTGGAGAC CGGTCGCTTC
CGGGCCCAGA TGCTGGTGGA GAGCGTGAAC GTCGGCCCAC GCACCATCCT GCTCGACCTC
TGA
 
Protein sequence
MRAVVQTVGR AQVTVDDVVV GAIDDGLLVL LGVTHSDTTQ TAQTLARKVH ELRILDGERS 
AADLGAPILV VSQFTLYGDA RKGRRPSWTA AAPAEVAEPL VTTVVEELRA RGAKVETGRF
RAQMLVESVN VGPRTILLDL