| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1437 |
|---|
| Symbol | |
|---|
| ID | 5057890 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 1630338 |
|---|
| End bp | 1631615 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640473705 |
|---|
| Product | peptidase S8/S53 subtilisin kexin sedolisin |
|---|
| Protein accession | YP_001158281 |
|---|
| Protein GI | 145593984 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1404] Subtilisin-like serine proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.948372 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0800108 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGTCGCG CCTTTGATCG ACCTGGGACT GTGTGGCGTC CACTTCCCAC GGCCGCCCTC
GCGCTCGTTC TCGCCCTCTG GCCTGCCAGA GTCGCGGCGG CGGAGCCCCT CGGAGAGGGC
CTGCCGCCGC TCGCGCAGCA GTCCGGCGGA TGTGTGCCGG CTTCCACCGC CCGTATCCCG
GATGTCCCAT GGGCCCAGCA CCGTTTGTCG CCGGCGCGGG TCTGGCCGCT GACCCGCGGG
GAAGGCCAAG TCGTCGCTGT GATCGATTCC GGTGTGGAGG CTGTGCCCCA ACTCGCTGGC
GGGCGACTCG ATCAGGTGGA GGTCGTCCGC GGCCCGAGCG GCGTGGATGA CTGTCCCGGC
CACGGCACCT TCGTCGCTGG CCTGATCGCG GCCCGTCCAG TCAGCGGTAC CGGCTTCAGT
GGCGTTGCCC CAGCCAGCAC GATCCTGCCC GTCCGGCAGA CTGGCGACGG GCTCGACGGC
ACCGCTGCCA CCTTGGCTGA GGCCATTCGG GCCGCCACGG ACCGTGGGGC TGACATCATC
AACATTTCCA CGGCGTCGCT CTTTCCCGAT GAGACGTTGC GCCGCGCGGT CGAGTACGCC
AGCAGCAAGG ATGTGCTCAT TGTGGCCGCG GTGGCCAACG AACGGGGAAG CGGCAACACC
CGCCCGTATC CGGCCGCGTA CCCAGAGGTG CTCGCGGTCG GGGCGATCGG CCCTGATGGT
GCCCCGGCTG ACTTCTCCGG TTCCGGAGAC TTCGTCGATC TGGCGGCTCC GGGCAGCAGC
ATCGTCAGTA TCGGCCCACG TGGCGGCGGC CACCTAACCG CGACCGGCAC CAGCTACGCC
GCGCCGCTGG TCGCCGGCAC CGCCGCACTC GTGCGGGCCT ACCACCCTCA GTTGACGGCG
GAACAGGTGC GGCGTCGGCT GCAGTTGACG GCGGACAGAC CAAGCGGTTC GGTGCCGGAC
CCGCGACTCG GCTGGGGCGT GGTGAACCCG TACGCGGCGG TGGCGTCCAT CTTGCCGGAA
GCCACTGGTG GCCCGCCCAC CGCGTCGCCG GTTGTGGTGT CGGCACCAAC CCGCCCGGAT
GACGGTATGC CGGGACGTAT CGTAGCGCTT CTTATCGCGG CTGCTGCGAG CACGCTGGTC
GTCGTCATGC TGGTGGCCCG GGCGGTTGTG CCCCGGGGAC GGCGCAGGCG CTGGCAACCA
GCGGGATCAG CGGATCGATG GCAGTCATCG AGTGGCCCCG CAGCCAGGGG GAGGGGATCG
CGTGCTTTCC GGGACTGA
|
|---|
| Protein sequence | MSRAFDRPGT VWRPLPTAAL ALVLALWPAR VAAAEPLGEG LPPLAQQSGG CVPASTARIP
DVPWAQHRLS PARVWPLTRG EGQVVAVIDS GVEAVPQLAG GRLDQVEVVR GPSGVDDCPG
HGTFVAGLIA ARPVSGTGFS GVAPASTILP VRQTGDGLDG TAATLAEAIR AATDRGADII
NISTASLFPD ETLRRAVEYA SSKDVLIVAA VANERGSGNT RPYPAAYPEV LAVGAIGPDG
APADFSGSGD FVDLAAPGSS IVSIGPRGGG HLTATGTSYA APLVAGTAAL VRAYHPQLTA
EQVRRRLQLT ADRPSGSVPD PRLGWGVVNP YAAVASILPE ATGGPPTASP VVVSAPTRPD
DGMPGRIVAL LIAAAASTLV VVMLVARAVV PRGRRRRWQP AGSADRWQSS SGPAARGRGS
RAFRD
|
|---|
| |