| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1429 |
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| Symbol | |
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| ID | 5057882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 1607229 |
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| End bp | 1607936 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640473697 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001158273 |
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| Protein GI | 145593976 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0320804 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTGTGC TCATCGACAA GTTCGACGTC TTCGCGGGTG GATTCTGGCT CACCCTCCAG
ATCTGCTTCC TCGCCGCGAT CGGTGCCCTG ATCCTGGGCT CCGCCGTGGC GGTGCTGCGG
ATATCCCCGG TGCCGCCACT ACGGGCGCTC GGCACCGCCT ACGTCAACAC CTTCCGTAAC
CTTCCATTGA CCATCGTCAT GTTCTTCGCC GCCTTCGGCC TCCCCGCGCT CGGTTCCAAC
GCGGACTTCC TCCGCATCCC CGGGCTCGAC CTCGTATTCA GCCGGCTCGG CACCGACCTG
CCATACTTCC GCTTCGCGCT GATCGCCCTG GTGCTCTACA CCTCGGCGTT CGTCTGCGAG
GCGCTGCGCT CCGGCGTGAA CGCGGTGCCC GCCGGCCAGG CGGAGGCGGC CCGCTCACTC
GGGCTGACCT TCATCCAGAA CCTGCGGCAC GTGGTGCTAC CGCAGTCGTG GACGGCGTCG
GTCGTTCCAC TCGGGTCCGT GATCATCGCG ATGATCAAAA ACTCGGCGCT GATCGGCTTC
TTCGGTGTCA TCGGCGACCT GTCCCAGACC GCGGACCAGC TCACCTCTGC TGGGGGCGAA
CCCTTCATCC CAGTCGCCAT CGGCATCTCG ATCGGATATC TGATCATGAC TGTACCTCTG
GGCGCGCTCC TCGACCGGAT CGAACGGCGG CAGGCGGTGG CTCGATGA
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| Protein sequence | MSVLIDKFDV FAGGFWLTLQ ICFLAAIGAL ILGSAVAVLR ISPVPPLRAL GTAYVNTFRN
LPLTIVMFFA AFGLPALGSN ADFLRIPGLD LVFSRLGTDL PYFRFALIAL VLYTSAFVCE
ALRSGVNAVP AGQAEAARSL GLTFIQNLRH VVLPQSWTAS VVPLGSVIIA MIKNSALIGF
FGVIGDLSQT ADQLTSAGGE PFIPVAIGIS IGYLIMTVPL GALLDRIERR QAVAR
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