| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1428 |
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| Symbol | |
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| ID | 5057881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 1606270 |
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| End bp | 1607232 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640473696 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001158272 |
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| Protein GI | 145593975 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0342583 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAGC AGAGCAGTGT CCTCTACGAC GTCCCCGGGC CCCGGCAGCG CCGGATCACC
CTGGTGGGCA GCGTCGCTGC CATCATTGGT CTGCTGGTCG GCGCGTACTT CCTCATTTAC
CGGCCGTTGG AGGAGACTGG CCAGTTCTCG ATGGAGCTGT GGGGTCCATT GATCGACCCC
GGGAACGAGA ACTTCGCCCT GGTCTGGGAG CGACTCGGCG TCGGAATCAA GAACACCCTC
ACCGCGGCGG CGCTGGCCAT CGTCACCTCG CTGGTGGTCG GCACCCTGCT CGCGGTGCTG
CGGATCCAGC TCAAGAGCCT GGCCCAACGC CGCTACACCG GGCTCGCCGC TCCCCTGGCC
TACCTGCTCC GCGGGCTGAA CCGCACGCTG TCGGCCGTGA CCCGGGTCTG CGTCGAGGTC
TTCCGAGGTC TGCCCGTCGT CATCACGATC TTCTTCGTGG CGCGTGGATT TCCCGAGTTC
GGAGTCACCT TCAACAGTCT CTGGTATCTG GTCATCGGCC TCACCATCTA CAACTCCGTG
GTGATCGCCG AGATCCTCCG CTCCGGCATG CAGGGCCTCG CCGGCGGGCA GGCCGAGGCC
GCCGCCGCGA TCGGCCTCTC CCCGCTGCAG ACCACCCGGA TGATCCTACT TCCCCAGGCA
TTCCGGATCA TGCTTCCCGC GTTGATCAGT CAGCTCGTGG TGGTCCTGAA GGACACCTCG
CTCGGCTTCA TCATCAGCTA TGAGGAGACG CTGAACATCG GCAAGCAGAT CATCGGCGTG
TTGGACAACC CCATCCAGGT CTACACCGTG CTCGCCGTGC TGTTCATCGC CGTTAACTAC
TCGCTGTCGA AGCTGGCCCA GGCCGTCCAG CAGCGGCTCT CCCGCGGCCG GCGGACCGCC
GACACGCCAG CACAACAGCC GCCGTCCACG GCCCTCGCCT CGCAGGCCGA GGGCGGCGGT
TGA
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| Protein sequence | MTQQSSVLYD VPGPRQRRIT LVGSVAAIIG LLVGAYFLIY RPLEETGQFS MELWGPLIDP
GNENFALVWE RLGVGIKNTL TAAALAIVTS LVVGTLLAVL RIQLKSLAQR RYTGLAAPLA
YLLRGLNRTL SAVTRVCVEV FRGLPVVITI FFVARGFPEF GVTFNSLWYL VIGLTIYNSV
VIAEILRSGM QGLAGGQAEA AAAIGLSPLQ TTRMILLPQA FRIMLPALIS QLVVVLKDTS
LGFIISYEET LNIGKQIIGV LDNPIQVYTV LAVLFIAVNY SLSKLAQAVQ QRLSRGRRTA
DTPAQQPPST ALASQAEGGG
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