| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1404 |
|---|
| Symbol | |
|---|
| ID | 5057857 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 1577154 |
|---|
| End bp | 1577933 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640473673 |
|---|
| Product | NAD(P)H dehydrogenase (quinone) |
|---|
| Protein accession | YP_001158249 |
|---|
| Protein GI | 145593952 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2249] Putative NADPH-quinone reductase (modulator of drug activity B) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.411972 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTCGC TGATCGTTTA CGCCCACCCG GAGCCGAAGT CGCTCAACGG CTCCCTGAAG
GACCTCGCCA TCTCCACCTT GCGGACCGCC GGGCACGAGG TGCGGGTCAG CGACCTGTAC
GCGATGCGGT GGAAGGCGGT TGTGGACGCC ACCGACTACG GCCCCGAGGC CTCCAATCCG
CTCAGGGTCG CCCGGGACTC AGGCCGGGCC TTCGACGCCG GGACACTCAC CCCGGATGTC
CTCATCGAGC AGGAGAAGCT GCGATGGGCC GACGTGATTA TCTTTCAGTT TCCGCTGTGG
TGGTACACCA TGCCCGCGAT CCTCAAGGGC TGGGTGGATC GGGTGTTCAG CTCCCACTTC
GCATACGGCG TCGGCGAGTA CAGCGACACC AGGTTCGGTG ACCGTTTCGG TGAAGGCACT
CTTGCCGGCA GGAAGGCGCT GCTGTCGGTG ACCGTCGGTG GATCGGAGTC GCACTACTGC
GCTCGTGGGA TCAACGGCCC GATCGAGGAC CTCCTGTTTC CGATCCAGCA CGGCATCCTC
TACCACCCCG GCATCGAGGT GCTGCCGCCG TTCGTGCTCT ACAGCGCCGA CCGGTTGACC
AGCGAAGACT ACGCGGACGT CGCCAAAGCC TGGAAGCAAC GCCTGCTCAC CCTGGATTCG
ACTGAGCCGA TCGCGTTCCG ACAGCAGAAC TCCGGCGACT ACGAGATCCC CTCGCTACGT
CTGAAGGAGG GGGTGGAGCC CGCCGGCCGT ACCGGCTTTG GGCTGCATCT GCGACACTGA
|
|---|
| Protein sequence | MNSLIVYAHP EPKSLNGSLK DLAISTLRTA GHEVRVSDLY AMRWKAVVDA TDYGPEASNP
LRVARDSGRA FDAGTLTPDV LIEQEKLRWA DVIIFQFPLW WYTMPAILKG WVDRVFSSHF
AYGVGEYSDT RFGDRFGEGT LAGRKALLSV TVGGSESHYC ARGINGPIED LLFPIQHGIL
YHPGIEVLPP FVLYSADRLT SEDYADVAKA WKQRLLTLDS TEPIAFRQQN SGDYEIPSLR
LKEGVEPAGR TGFGLHLRH
|
|---|
| |