| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1402 |
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| Symbol | |
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| ID | 5057855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 1572314 |
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| End bp | 1576060 |
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| Gene Length | 3747 bp |
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| Protein Length | 1248 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640473671 |
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| Product | fibronectin, type III domain-containing protein |
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| Protein accession | YP_001158247 |
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| Protein GI | 145593950 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.215037 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCTGT TCCGCAGACT CCGGATCCCC TGGGCCGAGC GACCCGCCAC GGGCCCGACA
CACGGCACCG CCGATGGGTC CGACCCGCTG GTGCCGGCGG CCCGATGCGC GGACGGCACC
GCGACGGCAC CGCCAACATC CGCGCCGCCG GGCCCGGCGG CACCAGCGAC ACCGGCCCCA
GCACCGGACT CCGCGGCAGC GACGCTGGAC CCGGCGGCGC TGCCCCGCTA CTTCGGCCCG
GTGCCGAACC ACGCGCACAG TCCCCTGCCC GCCCTGGACG ACGACGGCGA CGTGGTGCCC
GGCACCGGCA TCCGAAAGTT CGTCGACCCG CTGCCCACGC TCGGCTCAGC CAACGACCCC
GGCCGCTTGC CCGTGGCCGT ACCCGACACC ATCACCTACC CGGGCTGCGA CTATTACGAG
ATCGGCCTCC AGGAGTACGC GCAACGGCTG CACCGGGACC TTCCGGCGAC CCGGCTGCGG
GGGTACCGGC AGCTGAACCT CGGCACCGAC TCGACCGGGC ACAACACTGT CGCACCACCG
AAACGCCCGG TCCACCTCGG CCCGGTGATC GTCGCGCGGC GCGGCCGACC AGTACGGGTC
AAGTTCATCA ACCAGCTTCC CGCCGGGCGA GCCGGTGAGC TGTTCCTACC TGTCGACCCG
ACCATCGACG GCGCAGGTCG CGGGCCACTC GACGGGCCCG CACCGTACCC GCAGAATCGG
GCGGTGCTGC ACCTCGCCGG CGCGCAGACC GGTTGGATCA GCGCCGGGAA CCCCTGGCAC
TGGATCACAC CAGCTGCGGA GATCACCCCG TACCCGACCG GTCCCGGGCT GACCGCCGTG
CCGGACATGC CGCCGCCCGG CAAGGGTGCC ACCACGCTGT ACTACCCGAA CGAGCAGAGC
GGGCGGCTGC TCGCGTTCCA CGACAACACC GTCGGGCTGG CCCGACTCAC CAGCTACTCC
GGACAGGTAG GTGTCTACCT GATCACCGAA CCAGCCGAGG ATGACCTGGT CGCCGACGGG
GTGCTGCCCG CCGACCAGAT CCCGCTGGTC TTCGAGGACA AAACCTTCGT GCCCGACGAC
AGCCAGCTGG CCGCCACCGA CCCGACCTGG GACCGCGACC GGTGGGGCGC GCGGGGCAGC
CTCTGGCACC CACACATCTA CCAACCCCGG CAGAACCCGT ACCGAGACGA CGGCATCAAC
CCGACCGGAC GCTGGGACTA CGGGCCGTGG ACGCGAACCG CCGAAGAGCT CGGGACGGAC
GGCACCGCCA GCCCCACCGG CCTCGGGACC GACGGCACAA CCGGACCACA CGACACCGGA
CCGAGCAGCG TCGGACCGGA GCCGGTCCCG AACCCACACC ACGACCCCGT CGGAGACGCC
TCGGACGAAC CGCCGATGGC ACCCGGCATA CCCCACCCGT CGGCGGTGCC GGCCGCGTAC
GGCGACACGG TGCTGGTCAA CGGCGTCGCG TACCCCTGGT TGGCGGTCGA ACCACGCGTC
TACCGGTTCC GCGTCCTCAA CGCGTGCCTG GACCGCAGCC TGAACCTCCA GCTCTACCAG
ACGCGCTCCG CCGGACCGAT GTGGGACAGC GACGGCGGGC TGGCCGACCC GGACGCTGGC
GAGGTGCCGA TGGTGGCGGC GACTCGGCTG CCCGGCCGGC CCGCCCGGTG GCCGACAGAC
GGGCGGGACG GCGGGGTTCC GGATCCGGTC GCCGTCGGCC CCGACCTGGT ACAGATCGGC
AACGACGGGG GCCTCCTACC GGCCCCGGCG GTACTCCCCA ACCAGCCGGT GACCTACCGG
TACGACCGAC GCGACCCCAC CGTCCTCAAC GTTGACCGGC ACACGCTGTT ACTCGCCCCC
GGGGAACAGG CCGATGTGCT GGTGGACTTC GCCACCGTCG CCCCCGGCAG CACCGTGCTC
CTCTACAACG ACGCCCCGGC CCCGCTCCCC GATCTCGACC CCCGCTACGA CCACCACACC
CACGCCCCGG ACCACACCGC CGAGGGCGGG ACACCACCGA GCCGTCCCGG GTATGGGCCG
AACACCCGCA CCCTGCTGCA GTTCCGGGTG GCCGGTATCG CGGCGCCCCG TTACGACCTG
GCCCGACTCC AGGAGCGGCT ACCCCGGGCG TACGCGGCCA GCCAGCGCCC GCCGATCGTG
CCGCAGCCCG CCTACGACGC AGCCTTCGGC ACCCACACGG CTCGGGAGAC CACCGTCCCG
GTGCATGCCA CCACGGTCTC ATTCACCCCG ACCGGAGACG TGTCCCCCGT CCTGCTGCCG
CTCGCCGTGA AGGTCATCGA GCAGATCTTC GAGCCCACGT ACGGCCGACT CGCCGGTCGC
TTCGGTGTCG GCCCGTCGCC CGGAGGGCCA CCCGCCCCTG CCGTGGTGCC ACTCGGCCCG
ACCGATCCGG CCACCGATGT GGTGCCAGTC GTCGGGACGG CGGTACCGGG AGGACCAGCC
AACGACGGTG TGCAGCTGTG GCGGCTGCGC GGTGCCAGCC GGCACACCCA GCCGGTACGT
CTCGACGGTG TCGACCTGCA ACTGGTCAAC CGAGCCGGGT GGGACGGCAC GCTCCGCCCA
CCGGCACCGA ACGAGGTGGG CTGGAAACAG GTGGTCCGGG TCAACCCACA TGAGGATGTG
GTGGTCGCGC TGCGCCCGGT CGCGCCGCCC CTCCCCTTCA AGATCGCGGA CAGTGTACGG
CCACTGGAGC CGGGCCGGCG GGCCCAGTTC CACCCCGGAG GAGCACCGCG CGACGGCCGA
GCTGCGCCCG CGGTCCATCA GCCGGTCAAC CTGGGCTGGG AATACCGCTG GCACAGCCAG
CTCGCCGGCT ACCGCGACCA GGGCCTGAGC CGACCGCTGG TGCTGCGGGT CGCCCCGCAG
GCTCCGACCG GGCTGTCCGC GACTCCAGGA CCCGGATCGG CCACCGCGCT GCCGGCGATC
CTGCTCGCGT GGACCGGCAA CGGCAATCGC CCCGCCGCCA CCAGCCACCA GCTCCAACGG
GCCACCGATC CGGCATTCAC CGCCGGGCTC GCCACGATCA CGGTGGCCGC CAGTGCCACC
CACTACACCG ACGCGACCAT CACGCCCGGG GTGACCTACT ACTACCGCAT CCGAGCGGAG
AACGCGGTCA GCTGCTCGGC CTGGTCGAAC TACGCGCCCG CCTCGGTGCG GCTCACCGCC
CCCACCGGCC TGGCCGCGGC GGTGCCGCCG GCGGCACCGC TACGGGTGGG GCTGCACTGG
CGCAACCGCT CCTTCGCCAC CGGCGTTGAC GTACAGCGCG CCACCAACCC CACCTTCACC
AGCGGGCCCG GCACCACGGC CATCAGCGTC GGCGACACCC ATCTGGACAC CGCCGTGGCG
CCGGACACCC GCTACTACTA CCGGGTCCGC ACCACCTACC TGGGCGCGGC CTCACCCTGG
TCCACCGTGG CGCAGGTGAT CACCCCACCC CGGCCGGGCG TACCGGAGTC GGTGACCGTC
ACCACCGCCA CGTCCGCACC GGACACCGCG ACGGTCATCC TCGGCTGGGC CGCGAGCGCA
CCCGCCGGGT CCGGTGCCGG GTTCACCGTG CAGCGGGCCG CGGACCCCGC GTTCACCCAG
GATGTCGCCA CCTTCACCGT GAATGGACGG GGGTTTACCA ACACCGGCCT GGCCCGCCAC
ACCACCTACC ACTATCGGAT CCGCGCGTTC AACGTCGTCG GGATGTCCCT CTTCACCGCC
CCGATCGCCG TGACGACGCC GGGTTGA
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| Protein sequence | MDLFRRLRIP WAERPATGPT HGTADGSDPL VPAARCADGT ATAPPTSAPP GPAAPATPAP
APDSAAATLD PAALPRYFGP VPNHAHSPLP ALDDDGDVVP GTGIRKFVDP LPTLGSANDP
GRLPVAVPDT ITYPGCDYYE IGLQEYAQRL HRDLPATRLR GYRQLNLGTD STGHNTVAPP
KRPVHLGPVI VARRGRPVRV KFINQLPAGR AGELFLPVDP TIDGAGRGPL DGPAPYPQNR
AVLHLAGAQT GWISAGNPWH WITPAAEITP YPTGPGLTAV PDMPPPGKGA TTLYYPNEQS
GRLLAFHDNT VGLARLTSYS GQVGVYLITE PAEDDLVADG VLPADQIPLV FEDKTFVPDD
SQLAATDPTW DRDRWGARGS LWHPHIYQPR QNPYRDDGIN PTGRWDYGPW TRTAEELGTD
GTASPTGLGT DGTTGPHDTG PSSVGPEPVP NPHHDPVGDA SDEPPMAPGI PHPSAVPAAY
GDTVLVNGVA YPWLAVEPRV YRFRVLNACL DRSLNLQLYQ TRSAGPMWDS DGGLADPDAG
EVPMVAATRL PGRPARWPTD GRDGGVPDPV AVGPDLVQIG NDGGLLPAPA VLPNQPVTYR
YDRRDPTVLN VDRHTLLLAP GEQADVLVDF ATVAPGSTVL LYNDAPAPLP DLDPRYDHHT
HAPDHTAEGG TPPSRPGYGP NTRTLLQFRV AGIAAPRYDL ARLQERLPRA YAASQRPPIV
PQPAYDAAFG THTARETTVP VHATTVSFTP TGDVSPVLLP LAVKVIEQIF EPTYGRLAGR
FGVGPSPGGP PAPAVVPLGP TDPATDVVPV VGTAVPGGPA NDGVQLWRLR GASRHTQPVR
LDGVDLQLVN RAGWDGTLRP PAPNEVGWKQ VVRVNPHEDV VVALRPVAPP LPFKIADSVR
PLEPGRRAQF HPGGAPRDGR AAPAVHQPVN LGWEYRWHSQ LAGYRDQGLS RPLVLRVAPQ
APTGLSATPG PGSATALPAI LLAWTGNGNR PAATSHQLQR ATDPAFTAGL ATITVAASAT
HYTDATITPG VTYYYRIRAE NAVSCSAWSN YAPASVRLTA PTGLAAAVPP AAPLRVGLHW
RNRSFATGVD VQRATNPTFT SGPGTTAISV GDTHLDTAVA PDTRYYYRVR TTYLGAASPW
STVAQVITPP RPGVPESVTV TTATSAPDTA TVILGWAASA PAGSGAGFTV QRAADPAFTQ
DVATFTVNGR GFTNTGLARH TTYHYRIRAF NVVGMSLFTA PIAVTTPG
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