| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1381 |
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| Symbol | |
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| ID | 5057834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 1548847 |
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| End bp | 1551204 |
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| Gene Length | 2358 bp |
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| Protein Length | 785 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640473650 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_001158226 |
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| Protein GI | 145593929 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR02696] guanosine pentaphosphate synthetase I/polynucleotide phosphorylase
[TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.491374 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.832187 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAGA GCAACCTCGG TACCGAGTCT CGTACCGCCA CGATCGACAA CGGGGCCTTC
GGCACCCGTG TGATCACCTT CTCCACCGGT CGGCTGGCCC GCCAGGCCGC CGGCTCCGTC
GTCGCCCAGC TCGGCGAGAC GGTCGTCCTC TCCGCCACCA CCGTTGGCCG GCAGCCGAAG
GAGCATTTCG ACTTCTTCCC GCTGACCGTC GACGTCGAGG AGCGGATGTA CGCGGCGGGC
CGGATCCCCG GCTCGTTCTT CCGCCGGGAG GGGCGACCCA GCGAGGACGC GATCCTCACC
TGCCGGCTGA TCGACCGGCC GCTGCGTCCC TCGTTCGTCA AGGGCCTGCG TAACGAGGTC
CAGGTCGTCG AGACCGTCCT GGCCCTCGAC CCCAGCCACC CGTACGACGT GGTGGCCATC
AACGCCGCCT CGATGTCGAC GAAGCTCTCC GGCCTGCCGT TCTCCGGCCC GATCGGGGCG
ACCCGGATGG CCCACATCGA CGGCTCGTGG GTCGCCTTCC CGACCCACGA GGAGCTGGTG
CGCGCCACCT TCGACATGGT GGTCGCCGGT CGGGCCCTGC CCGACGGCGA TGTCGCGATC
ATGATGGTCG AGGCGGAGGC CACCGCGCAC ACCGCGAAGC TGGTCGCCGA CGGCGCCTCC
GCACCGACCG AGGAGGTCGT GGCGAGCGGG CTGGAGGCGG CCAAGCCGGC CATCCGTGAG
CTGTGCCGCG CGCAGAGCGA GTTGGCCGAG GTGGCGGCCA AGCCGGTCGC CGAGTTCCCG
GTCTTCCTCG ACTACTCCGA TGACGTGTAC GACGCGGTCA CGGAGTTGGC CCGGGAGGAC
GTGGCCGAGG CCCTGAAGAT CGCCGGTAAG GCCGACCGCG AGGAGGCCCT GGACCGGATC
AAGGCCCGGG CGGTCGAGGA GCTCGGCCCG CGCTTCGAGG GCCGGGAGAA GGAGCTCTCC
GCCGCGCTGC GGTCGTTGAC CAAGTCCGAG GTCCGCAGCC GGGTGCTGCG CGAGCAGGTC
CGCATCGACG GCCGCGGCCC GCGGGACATC CGCCCGCTGA CCGCCGAGGT CGGGGTCCTG
CCCCGGGTGC ACGGCTCGGC GCTCTTCGAG CGGGGCGAGA CCCAGATCAT GGGCGTCACC
ACGCTGAACA TGCTCCGGAT GGAGCAGTCC CTGGACACGC TCTCCCCGGA GAAGTCCAAG
CGTTACATGC ACAACTACAA CTTCCCGCCG TACTCGACCG GGGAGACCGG CCGGGTCGGC
TCGCCGAAGC GGCGTGAGAT CGGCCACGGC GCGCTCGCCG AGCGGGCCCT GATCCCGGTG
CTGCCCTCGC GCGAGGAGTT CCCGTACGCG ATCCGGCAGG TCTCCGAGGC GCTCGGCTCC
AACGGTTCGA CCTCGATGGG CTCGGTCTGT GCCTCGACGC TCGGCCTGCT CTCCGCCGGT
GTGCCGCTGA AGGCGCCGGT CGCCGGCATC GCCATGGGCC TGATCTCTGA CGAGGTCGAG
GGGAAGACCC GGTACGTGAC GCTGACCGAC ATCCTCGGTG CCGAGGACGC CTTCGGTGAC
ATGGACTTCA AGGTCGCCGG TACGCAGGAG TTCGTCACCG CGCTTCAGCT CGACACCAAG
CTCGACGGCA TCCCGTCGGA TGTGCTCGCC GCGGCGCTCC AGCAGGCGTA CGAGGCCCGG
CAGACGATCC TGGAGGTGAT GCAGGCGGCG ATCGAGGCAC CGGCCACGAT GAGTGACTAC
GCGCCTCGGG TCACCACCGT CAAGATCCCG GTGGACAAGA TCGGCATGGT GATCGGCCCG
AAGGGGCAGA CGATCAACGC CATCCAGGAC GAGACGGGCG CCGAGATCTC GATCGAGGAC
GACGGCACCA TCTACGTCGG CGCGACCAAC GGGCCGGCGG CGCAGGCCGC GGTCGAGCGG
ATCAACGGGA TTGCGAACCC GACCCTGCCG AAGGTGGGCG ACCGCTTCCT CGGCACGGTG
GTCAAGACCG CCGCCTTCGG CGCGTTCATC TCGCTGCTTC CCGGCCGCGA CGGTCTGCTG
CACATCTCCA AGGTGGGCGA CGGCAAGCGC GTCGAGAAGG TCGAGGACTT CCTCAACGTT
GGTGACAAGG TTGAGGTGGA GATCGCCGAC ATCGACCAGC GGGGCAAGAT CTACCTGGAC
AAGGTGCGCC CGGAGGGCGC CGAGGCCCCG GCGGAGGGCG CCGCCGAGCG GCCGGCCGGT
CGGGACCGGG GCGACCGGGG ACCGCGCGAC CGCGGTGACC GCGGCGGCCG GGGTCCGGAC
CGTGGTGACA GCGGCGACGG TGGCGACGGT GGTGAGGGCG GCGAGTCGCG TCCGCGCCGT
CGTACCCGGC GCAGCTGA
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| Protein sequence | MTESNLGTES RTATIDNGAF GTRVITFSTG RLARQAAGSV VAQLGETVVL SATTVGRQPK
EHFDFFPLTV DVEERMYAAG RIPGSFFRRE GRPSEDAILT CRLIDRPLRP SFVKGLRNEV
QVVETVLALD PSHPYDVVAI NAASMSTKLS GLPFSGPIGA TRMAHIDGSW VAFPTHEELV
RATFDMVVAG RALPDGDVAI MMVEAEATAH TAKLVADGAS APTEEVVASG LEAAKPAIRE
LCRAQSELAE VAAKPVAEFP VFLDYSDDVY DAVTELARED VAEALKIAGK ADREEALDRI
KARAVEELGP RFEGREKELS AALRSLTKSE VRSRVLREQV RIDGRGPRDI RPLTAEVGVL
PRVHGSALFE RGETQIMGVT TLNMLRMEQS LDTLSPEKSK RYMHNYNFPP YSTGETGRVG
SPKRREIGHG ALAERALIPV LPSREEFPYA IRQVSEALGS NGSTSMGSVC ASTLGLLSAG
VPLKAPVAGI AMGLISDEVE GKTRYVTLTD ILGAEDAFGD MDFKVAGTQE FVTALQLDTK
LDGIPSDVLA AALQQAYEAR QTILEVMQAA IEAPATMSDY APRVTTVKIP VDKIGMVIGP
KGQTINAIQD ETGAEISIED DGTIYVGATN GPAAQAAVER INGIANPTLP KVGDRFLGTV
VKTAAFGAFI SLLPGRDGLL HISKVGDGKR VEKVEDFLNV GDKVEVEIAD IDQRGKIYLD
KVRPEGAEAP AEGAAERPAG RDRGDRGPRD RGDRGGRGPD RGDSGDGGDG GEGGESRPRR
RTRRS
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