Gene Strop_1372 details

Gene Information

• Locus tag: Strop_1372
• Symbol: rbfA
• ID: 5057825
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salinispora tropica CNB-440
• Kingdom: Bacteria
• Replicon accession: NC_009380
• Strand: +
• Start bp: 1541618
• End bp: 1542088
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 640473641
• Product: ribosome-binding factor A
• Protein accession: YP_001158217
• Protein GI: 145593920
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0858] Ribosome-binding factor A
• TIGRFAM ID: [TIGR00082] ribosome-binding factor A

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 0.589597
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 12
• Fosmid unclonability p-value: 0.116766
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCGGATC CGGCCAAGGT GCGCCGGCAC GCGGAGCGGG TGCGTGAGCT GGTGGCGTCG 
GTGGTACGCA GCCAGATCAA GGATCCTCGG CTTGGCATGA TCACCATCAC GGATGCGCGG 
ATCACCGCTG ACCTCCGCGA CGCCACGGTC TTCTACACGG TGCTCGGTGA CGCGTCCGCC 
CAGGCGAGCA CCGCCGCGGC GTTGGAGAGC GCCAAGGGCA TGGTGCGGAG CACCGTCGGG 
AAGGCGCTGG GGCTGCGCCA CTCGCCGACG CTGACCTTCG TCCTGGACGA CGTGCAGGAC 
CAGGTCAAGC ACATCGACGA CCTGCTCGCC CAGGCCCGCC ACGCGGACGC TGAGGTGCAG 
CGCCTCGCCA CCCGGGCCGA GTACGCGGGT GAGGCCCAGC CGTACCGGCT GGAGGAGGAG 
CCCGAGGGCT CCGGGGACGA GGTGCCGCCG CCGGGCGGGG ACCAACGGTG A 

 

Protein sequence

MSDPAKVRRH AERVRELVAS VVRSQIKDPR LGMITITDAR ITADLRDATV FYTVLGDASA 
QASTAAALES AKGMVRSTVG KALGLRHSPT LTFVLDDVQD QVKHIDDLLA QARHADAEVQ 
RLATRAEYAG EAQPYRLEEE PEGSGDEVPP PGGDQR