| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1370 |
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| Symbol | infB |
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| ID | 5057823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 1538083 |
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| End bp | 1541082 |
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| Gene Length | 3000 bp |
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| Protein Length | 999 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640473639 |
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| Product | translation initiation factor IF-2 |
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| Protein accession | YP_001158215 |
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| Protein GI | 145593918 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.515442 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.133918 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAGGCA AGGCCCGCGT ACACGAGCTC GCCAAGGAGC TCGGGGTCGA AAGCAAGACC
GTTCTCGCCA AGCTCAAGGA GATGGGCGAG TTCGTGAAGT CCGCGTCCAG CACGGTCGAG
GCGCCGGTCG CCCGACGGCT TCGTAACGCG TTCGTCAACA ACACCGGCTC GCCCGCGCCG
GCGGCTCCGC CGGCGGCGAC CCCGCCGACC CCGACCCCGA CTCCGACCCC TCCCCGGACC
CCGACCCCGG CGCCGCCCCC GGGCGGACCC CGCGTCACGG CCAAGCCCAT GCCGCCGCGG
CGGCCGGGTG CCCCGACGCC CGGCCCGAAG CCCAAGGGGC CGGTTCCGGG TCCGCCGCAG
TCCGCGACAC CGGCGGCCAA GCCGGCGAGC GCCCACGACA TCGAGGTGGC GGCCGCCGAG
GCGCGTGCCG CCGCACTGAA GGCCGAGCAG GAGGCCGCGG TCAAGGCCGC GCAGGCTGCC
CGGCAGCAGC AGCGGGACAA TGTCCGGCGG GAACCGCCCA CCGAGGGTGG TCCGCGCCCG
GGTCCCCGCC CCGGTCCCGG CGCGATGCCG CCCCGGCCCG GCTCTCCGGC CGCCGGACGT
TCCGGCGGGC CCACTCCGGG CCCCGGTCCC CGGTCCGGCG GTCGTCCGCC GGCGCGTGGC
GCCGGTAACA ACCCGTTTGG CATCCAGGGC GGCCAGCAGC GTCCCCCGGC CGCCGGTGCG
GGTGGTCCGC GGCCCAGCCC GGCGTCCATG CCGCCGCGGC CGAGCCCGGC GTCCATGCCG
CCGCGGCCGA GCCCGGCGTC CATGCCGAGT CAGCGGCCAG GCCGCCCCGG CGGTCCCGGT
TCCGGCCGTC CCGGAGCCGG CGCCGGCCGC CCCGGTGGCG GTGGCGGCGG CGGTGGTGGC
TACCGCGGCG GCGGTGGTGG CGGCGGCGGT GGCTACCGCG GCGGCCCCGG CGGCGGTGGC
GGTGGTGGCG GCGGCGGTGG CTACCGCGGC GGCCCCGGTG GTGGCGGCGG CGGTTTCCGC
GGCGGCCCCG GCGGCGGCCG TCCCGGTGGC GGTGGCCGTG GTCGTGGTGG CGGTGCCGCG
GGTGCCTTCG GGCGTCCCGG TGGCCGGCCG ACCCGCGGTC GGAAGTCGAA GAAGCAGCGC
AGACAGGAGT TCGACAACCT GTCGGCCCCG ACGATGTCCT CGGGTGCGCC CCGGGGACAG
GGTCAGACCG TCCGGTTGTC CCGAGGCGCC TCGCTGTCGG ATTTCGCCGA CAAGATCAAC
GCCAATCCGG GTTCGCTGGT CCAGGAGATG TTCAACCTGG GCGAGATGGT GACCGCGACC
CAGTCCTGCT CCGACGACAC CCTGCTGCTG CTGGGTGAAC ACCTGGGCTT CGTTGTCCAG
ATCGTCAGCC CGGAGGACGA GGACCGCGAG CTGCTCGCGC AGTTCAACAT CGACCTGGAC
GCCGAGGTGG CGGAGGACCG GCTGGTCAGC CGGCCGCCGG TGGTGACCGT CATGGGTCAC
GTCGACCACG GTAAGACGAA GCTTCTGGAC GCGATCCGGA AGGCGAACGT GGTGGCCGGC
GAGGCGGGTG GCATCACCCA GCACATCGGC GCTTACCAGG TCCACGTCCC GCACGACGAC
CAGGACCGGG CGATCACCTT CATCGACACC CCCGGTCACG AGGCGTTCAC CGCCATGCGT
GCCCGTGGCG CCCAGGTCAC CGACATCGTG ATCCTGGTCG TCGCGGCCGA CGACGGGGTG
ATGCCGCAGA CGATCGAGGC GCTGAACCAC GCCAAGGCGG CTGATGTGCC GATCGTGGTG
GCGGTCAACA AGATCGACAA GCCGGACGCC AACCCGGACA AGGTCCGCCA GCAGCTGACC
GAGTACGGAC TGGTCGCCGA GGAGTACGGT GGCGACACCA TGTTCGTCAA CGTGGCGGCC
AAGCCGGGCA CCGGGATCGA CAGCCTGCTC GAGGCGGTCC TGCTGACCGC GGACGCGTCG
CTGGAGTTGA CTGCTCCGAC GGACGGCCCG GCGCAGGGTG TCGCGATCGA GGCGCACCTG
GACAAGGGCC GAGGCGCGGT CGCGACGGTG CTGGTGCAGA AGGGCACCCT GCGGGCGGGC
GACTCGATCG TCGCCGGCGG AGCGCACGGC CGGGTTCGGG CGATGCTCGA CGAGAACGGC
AACCAGGTCG CCGAGGCGGG TCCGTCTCGT CCGGTGCTGG TGCTGGGTCT GACCGCGGTA
CCAGGGGCGG GCGACACGTT CCTGGCCGCC GAGGACGACC GCACCGTGCG GCAGATCGCC
GAGCAGCGGC AGGCGCGGCG GCGGGCGGCG GCGTTCGCCA ACTCCCGTGG CCGGGCCACC
CTCGAGACGC TCATGGAGCA GCTCAAGGCG GGCGAGAAGA CCTCGCTCAA CCTGGTGCTC
AAGGGCGACG TCTCCGGTTC CGTGGAAGCG CTCGAGGACG CCCTGTTCAA CCTCGACATC
CCCGAGGAGG TCCAGCTACG GATCATCCAC CGGGGCGTCG GGTCGATCAC CGAGAGCGAC
GTCATGCTCG CGAGCGCCTC GTCGGAGGCG GTCACGATCA TCGGCTTCAA CGTGCGGGCC
GCCAACAAGG TCCGCGAGAT GGCCGACCGC GAGGGCGTGG AGATTCGGTA CTACACCGTT
ATCTACCAGG CCATCGAGGA GATCGAGGCG GCGCTCAAGG GCCTACTCAA GCCGGAGTAC
GAGGAGGTCG AGCTGGGCAC CGCGGAGGTC CGCGAGGTGT TCCGTTCGTC CAAGGTCGGC
AACATCTCCG GCTGCATCGT CCGGTCGGGT CTGCTCCGGC GCAACGCCAA GGCCCGGCTG
CTGCGCGACG GCGCGGTGGT GGCGGACAAC CTCACCATCG GCTCGCTCAA GCGGTTCAAG
GACGACGCGA CCGAGGTACG TGAGGGCTTC GAGTGTGGTC TGACCCTGGC CGGTTACAAC
AACGTCCAGG TCGGCGACGT GATCGAGACC TTCGAGATGC GGGAGAAGGC GCGCGTCTGA
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| Protein sequence | MAGKARVHEL AKELGVESKT VLAKLKEMGE FVKSASSTVE APVARRLRNA FVNNTGSPAP
AAPPAATPPT PTPTPTPPRT PTPAPPPGGP RVTAKPMPPR RPGAPTPGPK PKGPVPGPPQ
SATPAAKPAS AHDIEVAAAE ARAAALKAEQ EAAVKAAQAA RQQQRDNVRR EPPTEGGPRP
GPRPGPGAMP PRPGSPAAGR SGGPTPGPGP RSGGRPPARG AGNNPFGIQG GQQRPPAAGA
GGPRPSPASM PPRPSPASMP PRPSPASMPS QRPGRPGGPG SGRPGAGAGR PGGGGGGGGG
YRGGGGGGGG GYRGGPGGGG GGGGGGGYRG GPGGGGGGFR GGPGGGRPGG GGRGRGGGAA
GAFGRPGGRP TRGRKSKKQR RQEFDNLSAP TMSSGAPRGQ GQTVRLSRGA SLSDFADKIN
ANPGSLVQEM FNLGEMVTAT QSCSDDTLLL LGEHLGFVVQ IVSPEDEDRE LLAQFNIDLD
AEVAEDRLVS RPPVVTVMGH VDHGKTKLLD AIRKANVVAG EAGGITQHIG AYQVHVPHDD
QDRAITFIDT PGHEAFTAMR ARGAQVTDIV ILVVAADDGV MPQTIEALNH AKAADVPIVV
AVNKIDKPDA NPDKVRQQLT EYGLVAEEYG GDTMFVNVAA KPGTGIDSLL EAVLLTADAS
LELTAPTDGP AQGVAIEAHL DKGRGAVATV LVQKGTLRAG DSIVAGGAHG RVRAMLDENG
NQVAEAGPSR PVLVLGLTAV PGAGDTFLAA EDDRTVRQIA EQRQARRRAA AFANSRGRAT
LETLMEQLKA GEKTSLNLVL KGDVSGSVEA LEDALFNLDI PEEVQLRIIH RGVGSITESD
VMLASASSEA VTIIGFNVRA ANKVREMADR EGVEIRYYTV IYQAIEEIEA ALKGLLKPEY
EEVELGTAEV REVFRSSKVG NISGCIVRSG LLRRNAKARL LRDGAVVADN LTIGSLKRFK
DDATEVREGF ECGLTLAGYN NVQVGDVIET FEMREKARV
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