Gene Strop_1369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1369 
Symbol 
ID5057822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1537657 
End bp1537989 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content70% 
IMG OID640473638 
Producthypothetical protein 
Protein accessionYP_001158214 
Protein GI145593917 
COG category[K] Transcription 
COG ID[COG2740] Predicted nucleic-acid-binding protein implicated in transcription termination 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.101372 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.315015 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTACGAC GCGCGCTGCC GGAGCGCACC TGTGTGGGTT GCCGGTCTCG GGCGTCAACC 
AAGGAACTGC TGCGGGTTGT CGCGGTGGGT GATGGGGCTG GTCACAGCCT TCGTCCCGAC
CCGTCCCGCA GGTTGCCGGG TCGGGGGGCA CATGTGCACC CAGATCCGGC CTGCTTCGCG
CAGGCGGTGC GGCGTCGTGC TTTCGGGCGG GCGCTGCGCG TCACCGGGGT TCCCGACCAC
GGTGAGCTCG CGACGCATCT CGATGCGCCA ACCACGACGT CCGGTCAACC CGACCGGACG
CGGGTCGCTA GCAAGGTAGG ACGACCGACA TGA
 
Protein sequence
MVRRALPERT CVGCRSRAST KELLRVVAVG DGAGHSLRPD PSRRLPGRGA HVHPDPACFA 
QAVRRRAFGR ALRVTGVPDH GELATHLDAP TTTSGQPDRT RVASKVGRPT