| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1368 |
|---|
| Symbol | nusA |
|---|
| ID | 5057821 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 1536598 |
|---|
| End bp | 1537641 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640473637 |
|---|
| Product | transcription elongation factor NusA |
|---|
| Protein accession | YP_001158213 |
|---|
| Protein GI | 145593916 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0195] Transcription elongation factor |
|---|
| TIGRFAM ID | [TIGR01953] transcription termination factor NusA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.219498 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.327685 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACATCG ACCTCGCGGC GCTGCGCGCA CTGGAGCGTG AGCGGGAAAT CCCGTTCGAC
ACGATCCTCG CGGCGATTGA GACCGCGTTG CTGACGGCGT ACCGGCACAC CGAGGGTGCT
CAGCCGCACG CACGGGTGGA GATCGACCGT AAGACGGGCG CGGCCCTGGT TTTCGCCCAG
GAGGTGGAGC CCGACGGCGG TGTGGTGCGG GAGTGGGACG ACACGCCGCA CGACTTCGGT
CGGATCGCGG CGATGACCGC CAAGCAGGTG ATTCTTCAGC GGCTGCGGGA GGCCACCGAC
GAGGTGCACT TCGGTGAGTA CGTGGGTCGT GATGGGGACC TGGTGACCGG GGTGGTCCAG
GCGCACGAGG CGCGTGCCGA GAAGGGCATC GTCAGTGTGG ACCTTGGCAA GCTGGAAGGG
GTGCTGCCCC AGTCCGAGCA GGTCCCCGGT GAGCAGTACG CACACGGCGA GCGGGTGCGC
TGCGTCGTGG TGCACGTGGC CAAGGGCGTA CGGGGTCCGC AGGTGACCCT GTCCCGCTCA
CACCCGGCGT TGGTGAAGAA GCTCTTTGCC CTCGAGGTGC CGGAGATCGC CGACGGCACG
GTGGAGATCA CCGCGATCGC CCGGGAGGCA GGTCACCGTA CGAAGATCGC TGTCCGCTCC
ACCGCGGCGG GGGTGAACGC CAAGGGTGCC TGTATCGGGC CGATGGGTCA GCGGGTGCGG
GCGGTCATGG GCGAGCTGCA CGGGGAAAAG ATCGACATTA TCGACTGGTC GGAGGATCCG
GCTGCCTTCG TCGGTAACGC ACTCTCGCCG GCCAAGGCCC TCCGGGTGGA GGTGGTCGAC
CTGGCTTCCC GTACCGCCCG GGTGACGGTG CCGGATTTCC AGCTTTCGCT GGCTATCGGA
CGGGAAGGGC AGAATGCTCG ACTTGCCGCC CGATTGACCG GTTGGCGGAT CGACATCCGC
TCCGACGCCG AGCCGGCCCG CCCGGCGGGC AATGCCGAAG CCGATCACGT CCCGGAGCCG
GGCCGCGCGA TCTCCGGGGG CTAG
|
|---|
| Protein sequence | MNIDLAALRA LEREREIPFD TILAAIETAL LTAYRHTEGA QPHARVEIDR KTGAALVFAQ
EVEPDGGVVR EWDDTPHDFG RIAAMTAKQV ILQRLREATD EVHFGEYVGR DGDLVTGVVQ
AHEARAEKGI VSVDLGKLEG VLPQSEQVPG EQYAHGERVR CVVVHVAKGV RGPQVTLSRS
HPALVKKLFA LEVPEIADGT VEITAIAREA GHRTKIAVRS TAAGVNAKGA CIGPMGQRVR
AVMGELHGEK IDIIDWSEDP AAFVGNALSP AKALRVEVVD LASRTARVTV PDFQLSLAIG
REGQNARLAA RLTGWRIDIR SDAEPARPAG NAEADHVPEP GRAISGG
|
|---|
| |