Gene Strop_1367 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1367 
Symbol 
ID5057820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1535939 
End bp1536601 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content73% 
IMG OID640473636 
Producthypothetical protein 
Protein accessionYP_001158212 
Protein GI145593915 
COG category[S] Function unknown 
COG ID[COG0779] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.54901 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.305959 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGC GTGGCCGGGC CACCAGGCCC ACCGGGCCGA CGGGTCGACC GCGGCGTACG 
GGTGGCCAGC GCAGCGCCGG TCGGGTCAGC CGCGGCGGTG ACCTCGCTAG CCGGCGGGCC
CGGCTGCACG AGGTTGTGGA ACCGGTCGTC GGCGAGGCCG GATACGACCT GGAGGAGCTG
TCGATCTCCC GGGCAGGTCG ACGCCACGTG GTGCAGGTGA TTGTTGACGC CGACGGCGGC
ATCGACCTGG ACGCCGTCGC CGATGTCTCA CGGGCTGTCT CCGCCGCCCT GGACGCGGCC
GAGGAGGCGC GCGGGGACAT CGTCGCCGGG GAGTATCAGC TCGAGGTCAG CTCGCCGGGT
GTGTCCCGCC CACTCACCCT CCCCCGGCAC TGGCGGCGCA ACGCCGGCCG ACTGGTCCGG
GTCACGGTGC GGGGTGGGCC GGACGCGGGT GACCGCCAGC TCACCGGCCG GGTGGTCGAG
GCGGACGATG AGCAGGTGGT GTTGGAGACC GACGCCGGTC GGGCGGGGTG GAGCTACGCC
GAGTTGGGCC CAGGACGGGT GCAGGTCGAG TTCACTCGCC CGGGCGAGAC AGATGGTGCT
GACGGCGCCG ACGAGGCCGG CGATTTCGAC GACGACGATG ATGTGGAGGG CGAGGAGAGG
TGA
 
Protein sequence
MSQRGRATRP TGPTGRPRRT GGQRSAGRVS RGGDLASRRA RLHEVVEPVV GEAGYDLEEL 
SISRAGRRHV VQVIVDADGG IDLDAVADVS RAVSAALDAA EEARGDIVAG EYQLEVSSPG
VSRPLTLPRH WRRNAGRLVR VTVRGGPDAG DRQLTGRVVE ADDEQVVLET DAGRAGWSYA
ELGPGRVQVE FTRPGETDGA DGADEAGDFD DDDDVEGEER