Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1367 |
Symbol | |
ID | 5057820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 1535939 |
End bp | 1536601 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640473636 |
Product | hypothetical protein |
Protein accession | YP_001158212 |
Protein GI | 145593915 |
COG category | [S] Function unknown |
COG ID | [COG0779] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.54901 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.305959 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAGC GTGGCCGGGC CACCAGGCCC ACCGGGCCGA CGGGTCGACC GCGGCGTACG GGTGGCCAGC GCAGCGCCGG TCGGGTCAGC CGCGGCGGTG ACCTCGCTAG CCGGCGGGCC CGGCTGCACG AGGTTGTGGA ACCGGTCGTC GGCGAGGCCG GATACGACCT GGAGGAGCTG TCGATCTCCC GGGCAGGTCG ACGCCACGTG GTGCAGGTGA TTGTTGACGC CGACGGCGGC ATCGACCTGG ACGCCGTCGC CGATGTCTCA CGGGCTGTCT CCGCCGCCCT GGACGCGGCC GAGGAGGCGC GCGGGGACAT CGTCGCCGGG GAGTATCAGC TCGAGGTCAG CTCGCCGGGT GTGTCCCGCC CACTCACCCT CCCCCGGCAC TGGCGGCGCA ACGCCGGCCG ACTGGTCCGG GTCACGGTGC GGGGTGGGCC GGACGCGGGT GACCGCCAGC TCACCGGCCG GGTGGTCGAG GCGGACGATG AGCAGGTGGT GTTGGAGACC GACGCCGGTC GGGCGGGGTG GAGCTACGCC GAGTTGGGCC CAGGACGGGT GCAGGTCGAG TTCACTCGCC CGGGCGAGAC AGATGGTGCT GACGGCGCCG ACGAGGCCGG CGATTTCGAC GACGACGATG ATGTGGAGGG CGAGGAGAGG TGA
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Protein sequence | MSQRGRATRP TGPTGRPRRT GGQRSAGRVS RGGDLASRRA RLHEVVEPVV GEAGYDLEEL SISRAGRRHV VQVIVDADGG IDLDAVADVS RAVSAALDAA EEARGDIVAG EYQLEVSSPG VSRPLTLPRH WRRNAGRLVR VTVRGGPDAG DRQLTGRVVE ADDEQVVLET DAGRAGWSYA ELGPGRVQVE FTRPGETDGA DGADEAGDFD DDDDVEGEER
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