Gene Strop_1363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1363 
Symbol 
ID5057816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1533551 
End bp1534264 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content73% 
IMG OID640473632 
Producthypothetical protein 
Protein accessionYP_001158208 
Protein GI145593911 
COG category[S] Function unknown 
COG ID[COG1814] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.883752 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGA CCCCGGCGGC GTTGCGGGAG GCACACCATG CGGATGTTTC TGGCGGCTGG 
CTGCGCCCCG CGGTCTTTGG GGCGATGGAC GGACTGGTCA CCAACATCGC CCTGATCGCG
GGGGTGGGTG GTGGCGGGGC GTCGGCGCAC GCCGTGGTCC TCACCGGCAC CGCCGGCCTG
GTCGCCGGGG CCATCTCCAT GGGGTTGGGG GAGTACACCA GCGTCCGGTC GGCCAATGAA
CAGGTCGCTG CGGAGGTGGC CAAGGAGCGG CGGGAGCTAG AGCGGCATCC CGAGGTCGAG
GCGCGCGAAC TGGCGGACAC CTGGGTGGCC CGCGGCCTGC CCCGGGAGCT CGCGACGCAG
GTCGCGGAGG TGGTGCGGCG CAACCCCGAG GAGGCGCTGC GGGTGCACGT CCGGGAGGAG
CTGGGCGTCG ATCCGGACGA CCAGCCGAGC CCGTGGGCGG CAGCGATCTC GTCGTTTGTC
TGCTTCTCCG TCGGCGCCCT GGTACCCCTG CTGCCCTACC TGCTCGGCAG CACCAGCCTC
TGGCTGGCCC TCGGCGTCGG CGGCTTCGGC CTCTTCCTGG CCGGCGCGAT CGTCGCTCGG
TTCACCAGCC GGCCCTGGTG GTCGGCGGGC CTACGTCAGC TGTTGCTGGG CGGCCTCGCC
GCCGCCGCGA CCTACGGCAT CGGCACCCTG ATCGGCGTCC AGGGCGGGCT GTAG
 
Protein sequence
MTETPAALRE AHHADVSGGW LRPAVFGAMD GLVTNIALIA GVGGGGASAH AVVLTGTAGL 
VAGAISMGLG EYTSVRSANE QVAAEVAKER RELERHPEVE ARELADTWVA RGLPRELATQ
VAEVVRRNPE EALRVHVREE LGVDPDDQPS PWAAAISSFV CFSVGALVPL LPYLLGSTSL
WLALGVGGFG LFLAGAIVAR FTSRPWWSAG LRQLLLGGLA AAATYGIGTL IGVQGGL