Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1363 |
Symbol | |
ID | 5057816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 1533551 |
End bp | 1534264 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640473632 |
Product | hypothetical protein |
Protein accession | YP_001158208 |
Protein GI | 145593911 |
COG category | [S] Function unknown |
COG ID | [COG1814] Uncharacterized membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.883752 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAGA CCCCGGCGGC GTTGCGGGAG GCACACCATG CGGATGTTTC TGGCGGCTGG CTGCGCCCCG CGGTCTTTGG GGCGATGGAC GGACTGGTCA CCAACATCGC CCTGATCGCG GGGGTGGGTG GTGGCGGGGC GTCGGCGCAC GCCGTGGTCC TCACCGGCAC CGCCGGCCTG GTCGCCGGGG CCATCTCCAT GGGGTTGGGG GAGTACACCA GCGTCCGGTC GGCCAATGAA CAGGTCGCTG CGGAGGTGGC CAAGGAGCGG CGGGAGCTAG AGCGGCATCC CGAGGTCGAG GCGCGCGAAC TGGCGGACAC CTGGGTGGCC CGCGGCCTGC CCCGGGAGCT CGCGACGCAG GTCGCGGAGG TGGTGCGGCG CAACCCCGAG GAGGCGCTGC GGGTGCACGT CCGGGAGGAG CTGGGCGTCG ATCCGGACGA CCAGCCGAGC CCGTGGGCGG CAGCGATCTC GTCGTTTGTC TGCTTCTCCG TCGGCGCCCT GGTACCCCTG CTGCCCTACC TGCTCGGCAG CACCAGCCTC TGGCTGGCCC TCGGCGTCGG CGGCTTCGGC CTCTTCCTGG CCGGCGCGAT CGTCGCTCGG TTCACCAGCC GGCCCTGGTG GTCGGCGGGC CTACGTCAGC TGTTGCTGGG CGGCCTCGCC GCCGCCGCGA CCTACGGCAT CGGCACCCTG ATCGGCGTCC AGGGCGGGCT GTAG
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Protein sequence | MTETPAALRE AHHADVSGGW LRPAVFGAMD GLVTNIALIA GVGGGGASAH AVVLTGTAGL VAGAISMGLG EYTSVRSANE QVAAEVAKER RELERHPEVE ARELADTWVA RGLPRELATQ VAEVVRRNPE EALRVHVREE LGVDPDDQPS PWAAAISSFV CFSVGALVPL LPYLLGSTSL WLALGVGGFG LFLAGAIVAR FTSRPWWSAG LRQLLLGGLA AAATYGIGTL IGVQGGL
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