| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1358 |
|---|
| Symbol | |
|---|
| ID | 5057811 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 1526482 |
|---|
| End bp | 1527789 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640473627 |
|---|
| Product | sodium:dicarboxylate symporter |
|---|
| Protein accession | YP_001158203 |
|---|
| Protein GI | 145593906 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.521193 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAAGA TCCCCTTTTC CGTGCAGATC CTGCTCGGCC TCGCCCTCGG CGTGGCCCTC
GGCTACCTCG CCCGGGCCGC TGAGCTGAGC TGGCTGGCCA GCAGCCTCGA CACCGTCGGT
GGCCTCTTCG TCCAGCTCCT CAAACTGGCC GTGCCACCCC TGGTCTTCAC CGCCATCGTG
GTCAGCGTGG TCAGTCTGCG GGGCGTGGCC AACGCCGCCC GGCTGGCGCT GCGAACGCTG
CTCTGGTTCG GTGCCACCGC GCTCATCGCG GTCACCGTCG GCATCGGCCT CGGGCTCCTC
ACCGATCCCG GCCGCGGGGT CACCCTGGAC ACGGCCGACG CCACCGCCCC GACCAAGACC
GGCGCCTGGA CCGACTTCCT CTCCGGCATC GTGCCGACCA ACCCGGTCGG CGCGTTCGTC
GAGGGCAACG TCCTCCAGAT CGTCTTCCTC GCCCTCGTCA TCGGCGCGGC GGCCCTGCTG
GTCGGCCCGC CCGCCGAGCC GTTCGTCGAG CTCAACCGGG CCCTACTGGA AATCGTCCAG
AAGGCGCTGT GGTGGGTGAT CCGGCTCGCC CCGATCGGGA CCCTGGGTCT GATCGGCAAG
GCCGTCGCCA CGTACGGCTG GGACCTGCTG GCCCCACTGG CCCGCTTCAC CACCGCCGTC
TACGTCGGCT GCGCGATCGT GCTGTTCGTG GTCTACCCGC TGCTGCTGCT CGGCGCCGGC
CGACTCAACC CGCTGCGCTT CTTCGCTGGT GCCGGACCAG CGATCCAACT GGCCTTCGTC
TCCCGTTCCT CGGTCGGCAC CATGCCGGTG ACCCAGCGCG CGGTCGAACG GCTGGGAGTC
CCCCGCGAGT ACGCCTCGTT CGCGGTCCCG TTCGGTGCCA CCACGAAGAT GGACGGCTGC
GCGGCGATCT ACCCGGCCCT GGCCGCGATC TTCGTGGCGC AGGTCTTCGG GGTGGAGCTG
GGCGTCACCG ACTACCTGCT GATCGCCTTC GTCTCCGTGG TCGGGTCGGC GGCGACCGCC
GGCCTCACCG GCGCGATCGT CATGCTCACG CTGACGCTGA GCACGCTCGG CCTGCCGCTG
GCCGGCGCGG GCCTGCTGCT GGCCATCGAC CCCATCCTGG ACATGGTCCG CACCGCGACC
AACGTCGCCG GGCAGGCCCT CGTGCCGACG ATCGTGGCGG CCCGGGAGGG CACCCTCGAC
CGGACCGCGT ACGACTCGGC CGGCCGACGG AGCCTGGTTG ACGATGAGCC GGTCGAGCGC
GACTCTCGGC CCGGCCAGCG CGAGGAGCCG ACCTTGGCCC CCGCCTGA
|
|---|
| Protein sequence | MRKIPFSVQI LLGLALGVAL GYLARAAELS WLASSLDTVG GLFVQLLKLA VPPLVFTAIV
VSVVSLRGVA NAARLALRTL LWFGATALIA VTVGIGLGLL TDPGRGVTLD TADATAPTKT
GAWTDFLSGI VPTNPVGAFV EGNVLQIVFL ALVIGAAALL VGPPAEPFVE LNRALLEIVQ
KALWWVIRLA PIGTLGLIGK AVATYGWDLL APLARFTTAV YVGCAIVLFV VYPLLLLGAG
RLNPLRFFAG AGPAIQLAFV SRSSVGTMPV TQRAVERLGV PREYASFAVP FGATTKMDGC
AAIYPALAAI FVAQVFGVEL GVTDYLLIAF VSVVGSAATA GLTGAIVMLT LTLSTLGLPL
AGAGLLLAID PILDMVRTAT NVAGQALVPT IVAAREGTLD RTAYDSAGRR SLVDDEPVER
DSRPGQREEP TLAPA
|
|---|
| |