| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1354 |
|---|
| Symbol | |
|---|
| ID | 5057807 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 1520380 |
|---|
| End bp | 1521381 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640473623 |
|---|
| Product | regulatory protein, MerR |
|---|
| Protein accession | YP_001158199 |
|---|
| Protein GI | 145593902 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0789] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCTCG TGGAGATGAA CCAGCTGTAC CCCATCGGGG TTGTCGCCCG ACGGACCGGC
CTGAACATCA GCACCGTCCG GTACTACGCG GACGCCGGTG TCGTCACACC CTCCGCCAGT
ACCCCGGCCG GTCACCGCCT GTACGACGTG TCGGCCATCG CTCGACTGGA ACTGGTCCGG
ACGCTACGGG AACTCGGTGC CGGCCTGGGC GAGATCCGGC GGGTGCTGGC TGGTGAGGCG
ACGTTGCGCG AGTTGGCCGC CACCCACCTG GCCCTGTTGG AACGGCAGGA GGCGCGGCTG
CGCAGGCGTC GCGCGGTGCT GTCGACGATC GTCAGGCAGG ACTCCACGGC CGAGCAGGTA
TTGCTGATGC ACAAGCTGGC CGGAATGTCG GACGAGGAGC GCGACCAGTT GGTCGACGAG
TTCTGGACCG AGGTCTGCAC CGGTTGGGAG CCGCCGGAAC GGATGACTGA GTGGTGGCGG
GCGGCGCGGC CGGAACTGCC CGACTATCCC ACCGCGGCGC AGTTGGAGGC GTGGATCGAG
CTGGCCGAGC TGGTCCGGGA CACCGAGGCT CGACAGGCCG TACGCCGTGA GCTGTACGAG
GTGTGCACCA CCGGGGCCGG GCCGCTGATG ACCTCGTCGC CGATGCTGGA CAGCCTGGAG
GCGGCCACGC CGATCGGCCA GGCCGCGATG GACGCGGCGC GGGAGCAGGT GCCACCGGAC
TCGCCACGGG GGCGGGCGGT CGCCGACCAG TGGATCGGGT GGCTGACCGG CATCTTCGCG
ACGCCGGACG CCCCCGGGAC GCCGGACACT CCTGAGTTCC GGATCCAGAC GGCCGACCAC
ATGCTGGCGG GCGCGGAGTG GGACCGCACG CCACCGCTGC CGGAGGGACC GTTCGACCGA
TACATGGCGC TGGTCACGAC CGTGAACAAC GCGCCGCAGG AGCAGTTCCC GTGGGAGTGG
CTAGCCGCGG CACTGCGCGC ATCCGCCCTG CCTCCTCGCT GA
|
|---|
| Protein sequence | MSLVEMNQLY PIGVVARRTG LNISTVRYYA DAGVVTPSAS TPAGHRLYDV SAIARLELVR
TLRELGAGLG EIRRVLAGEA TLRELAATHL ALLERQEARL RRRRAVLSTI VRQDSTAEQV
LLMHKLAGMS DEERDQLVDE FWTEVCTGWE PPERMTEWWR AARPELPDYP TAAQLEAWIE
LAELVRDTEA RQAVRRELYE VCTTGAGPLM TSSPMLDSLE AATPIGQAAM DAAREQVPPD
SPRGRAVADQ WIGWLTGIFA TPDAPGTPDT PEFRIQTADH MLAGAEWDRT PPLPEGPFDR
YMALVTTVNN APQEQFPWEW LAAALRASAL PPR
|
|---|
| |