Gene Strop_1345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1345 
Symbol 
ID5057798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1511129 
End bp1511830 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content73% 
IMG OID640473614 
ProductNitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 
Protein accessionYP_001158190 
Protein GI145593893 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.922844 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCAGC GGCTGAGCAT CGCGGTGGCA CAGCCCCGGT GCGTCGCGTA CGACGTGGCG 
GTCAACGCGG CAGCTCATGC GGTGGCTGTC CGGGCGGCGG ACGCGCGGGT GGTGGTGTTC
CCCGAGATGT CGCTGACCGG CTACGAACTG GACGCGCTGC CGGTCGCTCC CGACGATGAA
CGGCTGGCGC CCATTGTCGC GGCCTGCGCT GAGACCGGGG CGCTTGCGCT GGTCGGCGCC
CCGGTGCCCG GACCGAGCAT CGGTGTGCTG GCAGTGGACG GGGATGGTGC GTGGGTGGCC
TACCGGAAGG TCCACCTGCA CGGCGTGGAG ATTGATCGTT TCGTCCCCGG CGAACCCACG
GTGATCGACG TGGACGGGTG GCGGCTGGGC CTTGCCGTCT GCCGCGACAC CGGCGTTCCC
GAGCATGCCG CCAAGACGGT CGCGCTGGGG ATTGACGGTT ATGTGGCGGG CGTGGTCCAC
GCCGATGACG AGGTCGACGT TCACGGCGAG CGGGCCCGTC GGGTCGCCGC CGACCACGGT
GTCTGGGTGG CCGTGGCAGC CTTCGCGGGG CCGACCGGTG GCGGCTTTGC CCGCACGTCC
GGCCGTTCGG GCATCTGGTC CGCTGCCGGG GAACTGGTCG CCGAGGCAGG CGTCGCCCCC
GACGAGGTCG CCCGTGCGAC CCTCGCCCGG AGCGTGCGCT GA
 
Protein sequence
MEQRLSIAVA QPRCVAYDVA VNAAAHAVAV RAADARVVVF PEMSLTGYEL DALPVAPDDE 
RLAPIVAACA ETGALALVGA PVPGPSIGVL AVDGDGAWVA YRKVHLHGVE IDRFVPGEPT
VIDVDGWRLG LAVCRDTGVP EHAAKTVALG IDGYVAGVVH ADDEVDVHGE RARRVAADHG
VWVAVAAFAG PTGGGFARTS GRSGIWSAAG ELVAEAGVAP DEVARATLAR SVR