Gene Strop_1344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1344 
Symbol 
ID5057797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1510337 
End bp1511068 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content68% 
IMG OID640473613 
ProductClp N terminal domain-containing protein 
Protein accessionYP_001158189 
Protein GI145593892 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0542] ATPases with chaperone activity, ATP-binding subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAC CATTGATGAT GACCCACCCG GTACGCCTCG ACGAGCTGAT CGACCACATC 
AAGCAGGCGC ACACCAATGC ACTGGACCAA CTCGCCGACG CGGTCCTTGC CGGGGACCAC
CTCGGCGAGG TGGCTGACCA TCTGATCGGG CACTTCGTTG ACCAGGCCCG ACGCTCGGGC
GCCTCGTGGA CCGAGATCGG CCGCAGCATG GGCGTCAGTA AGCAGGCCGC CCAGAAGCGC
TCGGCGGCGA AGGTGGCGAG CGCCGCGGCG CTGGAATCCG ATGCCGGCTT CAGCCGGTTC
ACCACCCGGG CCCGCAACGT CGTCATCGCC TCCCAGGAGG AGGCGCGGGC CGCTGGAAAC
GTCGAGATCG GTCCGGTGCA CCTGGCGTTG GGCCTGCTGG TCGACCCGGA CGCGCTCGCC
CCTCAACTGA TCACGGCGCG AGGGGTGTCC CTGGACCGCC TGGCAGACGC GGTCGCGGCG
ACCCTACCGC CACGCGTCGA GCAGGTCCCG GACCTGATCC CGTACGATGC ACGGGGCAAG
AAGGTCCTGG AGCTCACCTT TCGGGAGGGG CTTCGACTCG GCCACAATTA CATCGGGACC
GAGCACATTC TGCTCGCCCT CCTCGAGGCC GAGGACGGCG ACGGCGTGCT CACCGGCCTC
GGCCTCGAGA AGGAAGGGGT GGAGGCCGCG CTCCAAGGTG CACTCGCCGC GCTCACCCGA
AAGAAGAGCT GA
 
Protein sequence
MAEPLMMTHP VRLDELIDHI KQAHTNALDQ LADAVLAGDH LGEVADHLIG HFVDQARRSG 
ASWTEIGRSM GVSKQAAQKR SAAKVASAAA LESDAGFSRF TTRARNVVIA SQEEARAAGN
VEIGPVHLAL GLLVDPDALA PQLITARGVS LDRLADAVAA TLPPRVEQVP DLIPYDARGK
KVLELTFREG LRLGHNYIGT EHILLALLEA EDGDGVLTGL GLEKEGVEAA LQGALAALTR
KKS