| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1317 |
|---|
| Symbol | |
|---|
| ID | 5057770 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 1480362 |
|---|
| End bp | 1481339 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 640473589 |
|---|
| Product | phage integrase family protein |
|---|
| Protein accession | YP_001158165 |
|---|
| Protein GI | 145593868 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGCGGG GCGAAGCGAC CCGGGCTCTA CACGCAGCGC TCCCTGCGCC GCTATGCGAG
GCGGCGGATG ACTTCGCGAA CCACCTAGCC CAGGTCCAGA ACCGCTCCAC TCACACCGTC
CGGGCGTACG TCGCCGATGT CATCAGTCTG CTCGACCACG CCGTACGGGC GGGAGCCCGG
ACTCCCGCGG ACCTCACGCT GGCACAGATC CGCAGCTGGC TTGCCCGGCA GCGAACGACG
GGAGCCGCCC GGTCCACGTT GGCTCGGCGA TCCGCCGCGG CCCGCACCTT CAGCGCCTGG
GCGCACCGCG ACGGCCGACT ACCGGTCGAC GTGGCCGCCG GCCTGGCCAG TCCCCGCGCC
CACCGGGAAC TCCCCGCCGT ACTCCCGGTC GATCAGGCAG CCGCCCTGTT GGAGACGGCG
CACGCGGCGC CCCGGGGTCA GCCGACCGAT GACGTCCCGC CTGGTGCCGC CGACCCGGTG
CGGCTGCGGG ACCAGTTGCT GCTGGAGCTG CTGTACGCGA CCGGGGTCCG GGTCAGTGAG
GCGTGCGGCC TGAACGTCGC GGACGTGGAC CCGGGCCGGC GGGTGCTCCG GGTGTTCGGC
AAAGGGGGCC GGGAACGCAG CGTGCCGTAC GGGGTCCCGG CGCAGCGGAC GCTCGACGCG
TGGCTCCGCC ACGGCCGCCC CCGGCTGGTC GGCGCCCAGT CGGCGAACGC GCTGCTGCTC
GGGGCGCGGG GCGGCCGGCT CAACCCGACC ACGGCGCGGG GGATCGTCGG CCGGTACACG
ACGGCGGCGG GCCTACCCCG GACCAGCCCG CACGGGCTTC GGCACACGGC GGCGACCCAC
CTGTTGGAGG GCGGCGCGGA CCTGCGGACG GTGCAGGAGC TCCTCGGTCA CTCCTCGCTG
GCCAGCACCC AGATCTACAC GCACGTGTCG GTCGAGCGGC TGCGGTCCGC GTACCGGCAG
GCCCACCCTC GTGCGTGA
|
|---|
| Protein sequence | MKRGEATRAL HAALPAPLCE AADDFANHLA QVQNRSTHTV RAYVADVISL LDHAVRAGAR
TPADLTLAQI RSWLARQRTT GAARSTLARR SAAARTFSAW AHRDGRLPVD VAAGLASPRA
HRELPAVLPV DQAAALLETA HAAPRGQPTD DVPPGAADPV RLRDQLLLEL LYATGVRVSE
ACGLNVADVD PGRRVLRVFG KGGRERSVPY GVPAQRTLDA WLRHGRPRLV GAQSANALLL
GARGGRLNPT TARGIVGRYT TAAGLPRTSP HGLRHTAATH LLEGGADLRT VQELLGHSSL
ASTQIYTHVS VERLRSAYRQ AHPRA
|
|---|
| |