| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1294 |
|---|
| Symbol | |
|---|
| ID | 5057747 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 1455427 |
|---|
| End bp | 1457160 |
|---|
| Gene Length | 1734 bp |
|---|
| Protein Length | 577 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640473566 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001158142 |
|---|
| Protein GI | 145593845 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3540] Phosphodiesterase/alkaline phosphatase D |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.450689 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCCG CAGACCTGCT CGTCGGCCCG CTGCTGCGCC GGGTTGTCGG CACGCAGGCC
ACCATCTGGG TGGAGACCAG CGCCCCCGCG ACGGTCACCG TCCGTACGGC CGATGGCGCC
ACCGGCACCG CGTCCACCTT CTCCGCCTAC CAGCACCACT ACGCCCTGGT CGTGGTCTCC
GGGCTGACGC CCGACACCGC CACCAGCTAC GAGGTGCTGC TCGACGGGGA ACCCGTCTGG
CCGCAGCCCC GCCCGTACCG ACCCAGCATC ATCCGCACCC GGGCCACCGA CGACCGGGAA
CAGCCGGTAC GCCTGGTGTT CGGCTCGTGC CGGGAAACCA CCCAGCGCGC CACCGCCCGC
CGGCTGCCCC CGGACGCGCT CGACGCGTAC GCGCGTGGGT TGGCCGCCAC CGGCGATCCG
GCGGACCTGC CCGACCTGCT GGTGCTCCTC GGGGACCAGG TCTATGCCGA CGAGACCTCA
CCGACCGTAC GACGGTTGCT CCGGCGGCGG CGTCGGCGGC CGGTGGGCGC GCCGGTGGAC
CAGGTGGTGA GCTTCGACGA GTACACCAAG CTCTACCTGG AGTCGTGGCG CGCCCCGGAG
ACCCGCTGGC TGCTCTCCAC CGTGCCGAAC GTCATGATCT TCGACGACCA CGAAATCGTG
GACGACTGGA ACACCTCCGC TGCCTGGCGC GCGGACGCGC GTGCCCAGCC CTGGTGGGGC
GAGCGCATCA GCAGCGGGCT GGCCTCCTAC TGGGTCTACC AGCACCTGGG CAACCTCGCC
CCGGAGGAGA TCGCCGCCGA CCCGCTCTAC GCGAAGGTGA CCGTCGCCGA AGACGCCACC
GACGTACTCC GCGAGTTCGG CCACCGGGTC GACCGGGAGT CCGACCTCGC ACACGACCCC
GAACGGTGGC GGGCGGTTCA GTACCAGTGG AGCTTCGCGC TCGATGTCGG CCGAACCCGC
CTGGTCATGG TCGACAACCG GTGCAGCCGG GTGCTGGCGT CGGGCCGGCG GGCGATGCTG
CCGCCGGGCG AGTGGTCCTG GCTGGTCAAC CAGACCCACG GCAGCTACGA CCACCTGGTC
GTGGGGTCGT CCCTGCCCTG GCTGCTGCCG CCCGGCATCC ACCACGTGGA GGCGTGGAAC
GAGGTGCTCG CCGACTCCCA CCGGCGCTGG GTGGCCGACG CGGCGGAGAA GCTACGCCGC
GCTCTCGACC TCGAACACTG GGCGGCGTTC CGTCGCTCCT TCGACGCGCT CGGGAAGCTC
TTCGCCCGCA TCGGTGGTGG CACACCGGAC GGGGCGACCC GGCCACGCCG TGAGCCGGGG
CAGCCCGGGC AGCCGGTGGA GAGCGACCCG AGCCCCCCGC CGGCGTCGAT CAGTGTCCTC
GGCGGCGACG TGCACCACTC GTACGTGGCC CGGGCCCGGT TCGCCGATCC GGCGGTGGTC
ACCCCCGTAC ACCAGCTCAC CTGTTCCCCG CTGCACAACC AGGTGCCGGC CGGGATGCGT
CCGCTGCTGC GGCTGGGCTG GTCACCCGTC CTGGCCATGG CCGCCCGAGC ACTGTCTCGC
ACCGCCGGGA CCGACCGGCC GCCGCTGCGC TGGACGAAGC TGGCCGGCCC GTACTTCGGC
AACGCCATCG GCACCCTGCG ACACGACGGG CGGACGGCCG AGGTGACGAT CTCGGGCACC
ACCAGCGCGG GTGCGCTGCA CGAAGTGATG CGCCGCGACC TCACCAGCGG CTGA
|
|---|
| Protein sequence | MPAADLLVGP LLRRVVGTQA TIWVETSAPA TVTVRTADGA TGTASTFSAY QHHYALVVVS
GLTPDTATSY EVLLDGEPVW PQPRPYRPSI IRTRATDDRE QPVRLVFGSC RETTQRATAR
RLPPDALDAY ARGLAATGDP ADLPDLLVLL GDQVYADETS PTVRRLLRRR RRRPVGAPVD
QVVSFDEYTK LYLESWRAPE TRWLLSTVPN VMIFDDHEIV DDWNTSAAWR ADARAQPWWG
ERISSGLASY WVYQHLGNLA PEEIAADPLY AKVTVAEDAT DVLREFGHRV DRESDLAHDP
ERWRAVQYQW SFALDVGRTR LVMVDNRCSR VLASGRRAML PPGEWSWLVN QTHGSYDHLV
VGSSLPWLLP PGIHHVEAWN EVLADSHRRW VADAAEKLRR ALDLEHWAAF RRSFDALGKL
FARIGGGTPD GATRPRREPG QPGQPVESDP SPPPASISVL GGDVHHSYVA RARFADPAVV
TPVHQLTCSP LHNQVPAGMR PLLRLGWSPV LAMAARALSR TAGTDRPPLR WTKLAGPYFG
NAIGTLRHDG RTAEVTISGT TSAGALHEVM RRDLTSG
|
|---|
| |