Gene Strop_1291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1291 
Symbol 
ID5057744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1450546 
End bp1454142 
Gene Length3597 bp 
Protein Length1198 aa 
Translation table11 
GC content73% 
IMG OID640473563 
Productchromosome segregation protein SMC 
Protein accessionYP_001158139 
Protein GI145593842 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1196] Chromosome segregation ATPases 
TIGRFAM ID[TIGR02168] chromosome segregation protein SMC, common bacterial type 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.898682 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCATCTCA AGAGCCTGAC GGTCAAGGGC TTCAAGTCCT TCGCCTCAGC GACGACCCTG 
AAGCTGGAAC CGGGTATCAC CTGCGTGGTG GGTCCGAACG GTTCCGGCAA GTCGAACGTC
GTTGACGCCA TCGCCTGGGT CCTTGGCGAG CAGGGCGCGA AGGCGCTGCG GGGCGGCAAG
ATGGAAGATG TCATCTTCGC CGGCACCGCC GGACGGGCAC CGTTGGGCCG GGCCGAGGTG
ACCCTGACCA TCGACAACAC CGACGGCGCG CTGCCCATCG AGTACACCGA GGTCTCGATC
ACTCGCCGGA TGTTCCGCTC CGGTGAGAGC GAGTACGAGA TCAACGGCGA CTCCTGCCGG
TTGCTCGACA TTCAGGAGCT GCTCAGCGAC TCCGGCATTG GCCGGGAGAT GCACATCATC
GTCGGGCAGG GCCGGCTCGA CGGCATGCTG CACGCCAAAC CGGAGGACCG ACGGGCCTTC
ATCGAGGAGG CGGCCGGCGT CCTCAAACAC CGCAAGCGCA AGGAAAAGGC GCTGCGGAAG
CTCGACGCGA TGCAGACCAA CCTCAACCGG CTCACCGACC TCACCGTCGA ACTGCGCCGC
CAGCTCAAGC CACTCGGCCG GCAGGCCGAG GTGGCCCGAC GCGCCGCGGT CATCCAGGCG
AACCTGCGGG ACTCCCGGCT CCGACTGCTC GCCGACGACC TCGCCACCCT ACGCGGCACC
CTGGCCAAGG AGATCGCCGA CGAGACCGCG CTGCGCGAGC GGCGCGAGCG GGTCGAAGCC
GAGCACGCCG AGGTGCAGGC CCGCCTCGGC GAGCTGGAGG CGGCGCTCGC CGAGGACGCG
CCGCTGCTCG CCGCCGCCCA GGACACCTGG TACCGGCTCT CGGCCCTACA GGAGCGCTTC
CGGTCGATGG AGCAGCTCGC CCGAGAGCGA CGGCGTCACC TCAGCGCCAC GCCGGACGAT
GAGCGGCCGG GTCGTGACCC GGACCAGCTG GAGGCGGAGG CGGAGCACGT CCGTGAACAG
GAGGAGGAGC TCCGCGCGGC GCTCACCGAC GACCAGGTCC GGCTGGCGGA GGCGGTGGAG
CACCGCCAGG AGTTGGAGCG GCAGCTCGCC GCCGCCGAGC GGGAGCTGGT GGTGGCGGCG
AAGGCCATCG CCGACCGCCG GGAGGGGCTG GCTCGACTGG CGGGGCAGGT CAACTCCGCC
CGCGCCCGTA CCGCCACCGC CGGTGAGGAG ATTGAGCGCC TCACCTCCGC CTACGCCGAC
GCCCTTGCCC GGGCGGAGCG GGCCCAGGCC GAGCTGGACG CCGTGGAGGA GCAGTCCACC
ACGGCCGATC GGGACAACGC CGGCCTGGAT GCCCGCCACG CCGAGGCGGT CGCCGGCCAG
GAGCAGGCGC AGGCGGGGGT CCGCTCGTGC AGCGACGCCG AACGATCCGC CGAGAAGGAA
GCCGCCACCT GGAAGGCCCG CGAGGAGGCG CTCGCCCTGG GCCTGCGTCG CAAGGACGGC
GCGGGTGCCC TGCTGGCTCG GGCGAGCGAG GTGCCGGGGC TGCTCGGCGG CCTCTCCGGG
CTGCTCACCG TCTCACCCGG GCACGAGGCC GCGCTCGCCG CTGCGCTGGA CGGGCTCGCC
GACGCCGTCG TGGTCAGCGG CGTGGACGAG GCGGCCGAGG CGATCCGCCT ACTGAAGATC
ACCGATGCTG GTCGCGCTGG TCTCCTGGTG GGCAGCCCGG CCGGCCCGGG CATGACCGGC
CCGGCCGACG CGCTGCGCCC CAAGCTGCCC GATCGGGCCC AGTGGGCGCC GGACCTGGTG
GACTGCGCCC CGCAGATCCA ACCCGCCGTA CACCGGGCGC TACGCGATGT CGTCCTCGTC
CCCGACCTCG CCACCGCCGC CGAGGTCGTC GGCGACAACT CCGGGCTGCG AGCGGTCACC
CCGGAGGGCG ACGTGCTCGG GGCGTACGCC GCGGCTGGCG GGTCGGCCAA GGCGCCGAGC
TTCATCGAGG TACAGGCCGC CGTGGAGGAG GCGCGGACCC ACCGCGCCGC CGCCGAGCGG
ACCGCTACCC AGCTGCGCGA GCAGCTGGTG CAGGCGCGGG CCGAGGTGGC CGTGGCGAAG
GAGGCGGTGC AGCAGGCCGC CGCCGCGAAG CGGGAGGCCG AGAGTCACCG CAACGCCGCC
GCTCGCCGCC TCGCCGAACT GGGGGCCGCG GCGCGGTCGG CGCGGGCCGA GACCGAACGG
CTCGGCGCGG CCCGTTCCCG CGCGGTCGAG GCCCGCGAGC GGGATCTTGC CACCCTGACC
GAGATGGCGG AGCGGCTGCG GCTGGCCGAG GAGGCGCCGG CGGACGTCGA ACCCTCCGCT
GAGGAGCGCG ACGAGCTCGC CGCGGCGCTT CCCCGGGCCC GGCAGAACGA GATGGAGGTA
CGGCTGGCGG TGCGCACCGC CGAGGAGCGG GTTTCCTCGA TCGCCGGACG GGCCGACTCG
CTACGCCGGC AGGCCACGGC CGAGCGGGCC GCCCGGGAGC GGGCGGCGGC GCGGCGGGCG
GTGCGTGCTC GGGGCGCCGC GGTCGCCGGG GCGGTGGCCG CCGGAGCGCA CACGGCGCTG
GCCCGGCTCG ATGTCTCCAT CGCGCAGGCG GCACAGCAGC GGGACGCCGT GGCCGGTCAA
CGTGCCGCCC GGGAGGCCGA GCTCTCCGAG GTGCGCGGCG CGGCCAAGCG CCTCGGTGCG
GAGCTGGAGC GGCTGACCGG CCAGGTGCAT CGCGACGAGG TCGCCCGCGC CGAGCAACGG
CTGCGGATCG AGCAGTTGGA GGCGAAGGCG GCCGAGGACT TCGGCCTGGA CCTGACGACC
CTGATCGCCG AGTACGGTCC GGCGCAGCCG GTTCCGCCGA CCGACGCCGA GGTCGCCGCC
GCCGAACGGG ACGACCTGCC GGTGCCCGAG CCGGCCCCGT ACGAGCGGGC GGTGCAGGAG
AAGCGGGCCG CCAAGGCGGA GCGGGAACTC ACCCTGCTCG GTAAGGTCAA TCCCCTCGCG
CTGGAGGAGT TCGCGGCGCT GGAGGAGCGG TACAAGTTCC TCTCCGAGCA GCTTGAGGAC
CTGAAGGCCA CCCGGCGGGA TCTGCTGACC GTGGTCAAGG ATGTGGACGA CCGAATCCTG
GCGGTTTTCG CCAGCGCGTT CGCCGACACG GCCCGGGAGT TTGAACAGGT TTTCAGCGTG
CTCTTTCCCG GGGGTGCGGG GCGGCTGGTG CTCACCGAAC CGGACGACCT GCTCACCACC
GGCGTCGAGG TGGAGGCCCG CCCGCCGAGC AAAAAGATCA AACGGTTGTC GCTGCTCTCC
GGCGGGGAGC GGTCGCTGAC CGCGGTGGCG ATGCTGGTGG CGATCTTCCG TGCCCGGCCC
AGCCCGTTCT ACATCATGGA CGAGGTGGAG GCGGCGCTCG ACGACGTGAA CCTGGGCCGC
CTGCTGACGC TGCTCGCACA GCTGCGGGAG AAGAGTCAGC TGATCGTCAT CACGCACCAG
AAGCGGACGA TGGAGGTCGC GGACGCGCTC TACGGCGTGA CCATGAGAAG CGGGGTTACC
CAGGTAATCA GCCAGCGGCT CGACCGAGCC GGGGGCGGTC AGGAGGATAA CGAGTGA
 
Protein sequence
MHLKSLTVKG FKSFASATTL KLEPGITCVV GPNGSGKSNV VDAIAWVLGE QGAKALRGGK 
MEDVIFAGTA GRAPLGRAEV TLTIDNTDGA LPIEYTEVSI TRRMFRSGES EYEINGDSCR
LLDIQELLSD SGIGREMHII VGQGRLDGML HAKPEDRRAF IEEAAGVLKH RKRKEKALRK
LDAMQTNLNR LTDLTVELRR QLKPLGRQAE VARRAAVIQA NLRDSRLRLL ADDLATLRGT
LAKEIADETA LRERRERVEA EHAEVQARLG ELEAALAEDA PLLAAAQDTW YRLSALQERF
RSMEQLARER RRHLSATPDD ERPGRDPDQL EAEAEHVREQ EEELRAALTD DQVRLAEAVE
HRQELERQLA AAERELVVAA KAIADRREGL ARLAGQVNSA RARTATAGEE IERLTSAYAD
ALARAERAQA ELDAVEEQST TADRDNAGLD ARHAEAVAGQ EQAQAGVRSC SDAERSAEKE
AATWKAREEA LALGLRRKDG AGALLARASE VPGLLGGLSG LLTVSPGHEA ALAAALDGLA
DAVVVSGVDE AAEAIRLLKI TDAGRAGLLV GSPAGPGMTG PADALRPKLP DRAQWAPDLV
DCAPQIQPAV HRALRDVVLV PDLATAAEVV GDNSGLRAVT PEGDVLGAYA AAGGSAKAPS
FIEVQAAVEE ARTHRAAAER TATQLREQLV QARAEVAVAK EAVQQAAAAK REAESHRNAA
ARRLAELGAA ARSARAETER LGAARSRAVE ARERDLATLT EMAERLRLAE EAPADVEPSA
EERDELAAAL PRARQNEMEV RLAVRTAEER VSSIAGRADS LRRQATAERA ARERAAARRA
VRARGAAVAG AVAAGAHTAL ARLDVSIAQA AQQRDAVAGQ RAAREAELSE VRGAAKRLGA
ELERLTGQVH RDEVARAEQR LRIEQLEAKA AEDFGLDLTT LIAEYGPAQP VPPTDAEVAA
AERDDLPVPE PAPYERAVQE KRAAKAEREL TLLGKVNPLA LEEFAALEER YKFLSEQLED
LKATRRDLLT VVKDVDDRIL AVFASAFADT AREFEQVFSV LFPGGAGRLV LTEPDDLLTT
GVEVEARPPS KKIKRLSLLS GGERSLTAVA MLVAIFRARP SPFYIMDEVE AALDDVNLGR
LLTLLAQLRE KSQLIVITHQ KRTMEVADAL YGVTMRSGVT QVISQRLDRA GGGQEDNE