| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1288 |
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| Symbol | |
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| ID | 5057741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 1447321 |
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| End bp | 1448184 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640473560 |
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| Product | formamidopyrimidine-DNA glycosylase |
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| Protein accession | YP_001158136 |
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| Protein GI | 145593839 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0117449 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCTGAGC TGCCGGAGGT CGAGACCGTC CGGCAGGGGC TGGCGCAGTG GGTGACCGAC
CGGCGGATCG CCGAGGTGCA GGTACTGCAC CCGCGCGCGG TGCGCCGACA CGCGGCCGGT
GCCGCCCACT TCGCCGACGT GCTCAGGGAA ACGACGGTCC GGGACGTGCG GCGGCGCGGA
AAGTACCTGT GGCTACCGCT GGACAGCGGC GATGCCGTAG TCGGGCACCT CGGTATGTCG
GGGCAGCTGC TCCTGCAGCC GGCTGCGGCA CCGGACGAAA CCCACCTCCG GGTCCGGTTC
CGGTTCGCCG ACGACGGACC CGAGTTGCGC TTTGTCGACC AGCGGACGTT CGGTGGGTTG
TCGGTCAGCG CGGGGGGCGC GGAGCTGCCC ACGGAGATCG CACACATTGC CCGGGACCCG
TTGGACCCGG AGTTCTCCGA CGCCACGTTC GTCGCGGCGC TCCGCCGCCG CCGTACCGAG
ATCAAGCGGG CTCTGCTGGA TCAGACGCTG CTCTCCGGCG TGGGCAACAT CTACGCCGAC
GAGGCGCTCT GGCGAGCTCG GCTGCACGGC ACCCGCCCCA CCGACGGGCT GACCGGCCCG
GCCGTGCTGC GCCTGCTTGG ACACGTCCGG GATGTGCTCG GCGAGGCGGT CAAGGAGGGC
GGAACGAGCT TCGACGCCCT GTACGTCAAC GTCAACGGCG AGAGCGGCTA CTTCGATCGG
GCGCTGAACG TATACGGGCG GGCGGACCAG CCGTGCCGGC GGTGCGGTGA ACCGGTGCGC
CGCGAGGCGT TCATGAACCG GTCGTCGTTC AGCTGCCCGC GCTGCCAGCC GCGGCCCCGC
AGGGCGGTAC CGGCTCGCGG CTGA
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| Protein sequence | MPELPEVETV RQGLAQWVTD RRIAEVQVLH PRAVRRHAAG AAHFADVLRE TTVRDVRRRG
KYLWLPLDSG DAVVGHLGMS GQLLLQPAAA PDETHLRVRF RFADDGPELR FVDQRTFGGL
SVSAGGAELP TEIAHIARDP LDPEFSDATF VAALRRRRTE IKRALLDQTL LSGVGNIYAD
EALWRARLHG TRPTDGLTGP AVLRLLGHVR DVLGEAVKEG GTSFDALYVN VNGESGYFDR
ALNVYGRADQ PCRRCGEPVR REAFMNRSSF SCPRCQPRPR RAVPARG
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