Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1283 |
Symbol | |
ID | 5057736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 1444092 |
End bp | 1444589 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640473555 |
Product | hypothetical protein |
Protein accession | YP_001158131 |
Protein GI | 145593834 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.513406 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGACCCGC TCGATCGAAT CGACGAACTG ATCACCATGG TGGAGCAGGC CCGCTCCGTG CCGATGTCCC GCAACAACTG CATGTTCGAC CGAGGCGAGA TGATCGCTGT CCTCGACGAA CTGCGCGCCG AGTTGCCCGC GGACCTGCGC CGGGCCGCCG CGTTGCTCGA TGAGCGAGAC AAAATCATGG AGGCCGGAAA GCGTGAGGCC GACCGGATCA TCGCCGAGGG GGAGACGGAG CACGCCCGGC TCGTGTCGGT CAACGAGATC ACCGTCTCGG CCGAGCACGA GGGTGCGCGG ATCGTCGCCG AGGCGCGGGC CGAGGCGCAG CGTCTCCGGG ACGAGGTGGA CGACTACGTC GACACCGCGC TCGCCAACTT CGAGCAGTTC CTTACCCGGG CCCTCGCCTC GATCGAGCGG GGTCGGGACA AGATGCACGC GCTCCGGGAG ATCGGCACGT TCAGCGGAGA GGAGGCCGAA CGGCCGTTGA ACTTCTAG
|
Protein sequence | MDPLDRIDEL ITMVEQARSV PMSRNNCMFD RGEMIAVLDE LRAELPADLR RAAALLDERD KIMEAGKREA DRIIAEGETE HARLVSVNEI TVSAEHEGAR IVAEARAEAQ RLRDEVDDYV DTALANFEQF LTRALASIER GRDKMHALRE IGTFSGEEAE RPLNF
|
| |