Gene Strop_1278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1278 
Symbol 
ID5057731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1437332 
End bp1438957 
Gene Length1626 bp 
Protein Length541 aa 
Translation table11 
GC content75% 
IMG OID640473550 
ProductDak phosphatase 
Protein accessionYP_001158126 
Protein GI145593829 
COG category[R] General function prediction only 
COG ID[COG1461] Predicted kinase related to dihydroxyacetone kinase 
TIGRFAM ID[TIGR03599] DAK2 domain fusion protein YloV 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.67309 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGGACA CCCTCGATGC CGCCGCGGTT CGCCGTTGGT GCGCGGGCGG GCTGGTCGCG 
TTGAAGCGCC ACCAGGGCGA GATCGACCAC CTCAACGTCT ACCCGGTACC CGACGGTGAT
ACCGGCACCA ACCTGGTACT CACCCTCACC TCGGCCCAGC AGGCGTTGGC GATGGAGCTG
GACACGCTGC CCGACGACGG GCCCACCCCG CACGGGCAGG CGCTCCGGCT GATGGCTCGG
GGCGCGCTGC TCGGCGCCCG GGGTAACTCG GGAGTGATCC TGGCGCAGAT CCTGCGCGGC
TTCGCCGACG CGCTGGCCGC GGTCCCCGTG GTGCGGGGCC GGGCGTTGGC CGTCGCTCTG
CGCGCCGCCG CCACCGCTGC CTACGCCGCC GTCGCCGCTC CGGTCGAGGG GACGCTGCTC
AGCGTGGCTG CCGCCGCGGC CCGCGCCGCC GAGCGGGCCG GCCGCGACGA GTTGGGCACG
GTGGCCCGGG CCGCGGCCGA CGAGGCCGCC CAGGCCCTCG GCCGGACACC CCAGCAGCTA
CCGGCGCTGG CCCGTGCCCG TGTGGTTGAC GCCGGTGGGC GGGGCCTCTG TCTCCTGCTC
GACGCCCTGG TCGAGGTGGT CACCGGGGAG CCCCCGGCGC GTCCGGAGTT CACCGGCAGG
TCACCCCACC CGCCGGTCGA CGGTCCCCGC GAGCGCAGCG TGCCGACGTA CGCCTACGAG
GTGCAGTACC TGCTCGACGC CGAACCGGCC GCAGTGGCCC GGCTGCGCGA GGAGCTCGGC
GCCCTGGGTG ACTCGCTGGC GGTCGTCGGC GACGGCGCGG TCTCCGGTGG CACCTGGAAC
GTGCATGTGC ACGTCGACGA TGTCGGCGCG GCAATCGAGG CGGGAGTGGT CGCCGGTCGT
CCGCATCGGA TCGTGGTGAC CCGCTTCGCC GACCAGCCCA CGCCGCCCGC GTCACCGGAG
CCCGACCCGG TCCCGGACCG CCGGGCGGCT GTGGTGGTGG CCACCGGCGC TGGCATCGTC
GAACTCTGCG CGGCAGCGGA GGCGACGGTG GTGGAGGGCG TGCCCTCCAC CAGTGAGCTG
TTGAACGCCG TCCGTGCCAC TGGCGCGGGC CACGTCGTGG TGCTGCCCAA CGACCCCGAC
ACCCAGGCAG TGGCGAACGA CGCGGCCTCG GCGGCGTACC GGCTCGGCGT CAAGGTCAGC
GTGGTCCCGA CCCGGTCGCC GGTGCAGGCG CTCGCCGCGC TCGCCGTCCG GGACCCGGAT
CGGCGCTTCG AGGACGACGT GATCGCGATG GCCGAGGCCG CCGGCGCCTG CCGGTACGCG
GAGGTCTGCG TCGCCAGCCG GGCGGCCCTG ACCGTCGCCG GCCCCTGCCG GCCGGGGGAT
GTGCTCGCCC TGGTCGACGG TGAGGTGCAC CTCATCGGGT CGGACCTGCT CGACACCTGC
ACCGCCGTGG TCGATCGGAT GCTCGGCGGC GGTGGCGAGC TGGTGACCCT GCTGGTCGGA
GCGGACGCCC CCGCCGGCCT GACCGAGGCG GTCCGCGAGC ACGTGGTCCG CTCCTGGCCG
TTCGTCGAGG TGCAGGTGTA CCGGGGCGGG CAGCCGCACC ACCCGCTCCT GGTGGGGGTC
GAATGA
 
Protein sequence
MLDTLDAAAV RRWCAGGLVA LKRHQGEIDH LNVYPVPDGD TGTNLVLTLT SAQQALAMEL 
DTLPDDGPTP HGQALRLMAR GALLGARGNS GVILAQILRG FADALAAVPV VRGRALAVAL
RAAATAAYAA VAAPVEGTLL SVAAAAARAA ERAGRDELGT VARAAADEAA QALGRTPQQL
PALARARVVD AGGRGLCLLL DALVEVVTGE PPARPEFTGR SPHPPVDGPR ERSVPTYAYE
VQYLLDAEPA AVARLREELG ALGDSLAVVG DGAVSGGTWN VHVHVDDVGA AIEAGVVAGR
PHRIVVTRFA DQPTPPASPE PDPVPDRRAA VVVATGAGIV ELCAAAEATV VEGVPSTSEL
LNAVRATGAG HVVVLPNDPD TQAVANDAAS AAYRLGVKVS VVPTRSPVQA LAALAVRDPD
RRFEDDVIAM AEAAGACRYA EVCVASRAAL TVAGPCRPGD VLALVDGEVH LIGSDLLDTC
TAVVDRMLGG GGELVTLLVG ADAPAGLTEA VREHVVRSWP FVEVQVYRGG QPHHPLLVGV
E