Gene Strop_1273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1273 
Symbol 
ID5057726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1434336 
End bp1435025 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content72% 
IMG OID640473545 
Producthypothetical protein 
Protein accessionYP_001158121 
Protein GI145593824 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.170661 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCAGGC TGCCCGACTC ATCCAAGAGC ACCACCGCCC GGGACGACGC ATCCGCCCCC 
GCGGACGACA CCGTTGCCCG CCAGGAGGCC GCCGACGGCT CCGAACGGTC CCGAAAAGGC
GGCCGGGACC GTTCCAACCG GGGCGCGGCC TTGATCGCGA CAGCGGTCGC GCTCCCGGCG
ACCGTGCTGG CCGGCGTCCT GGCGTTCAAC CAGTTCGCCC CGGATCAGCC GGAATCCGAG
CCGAGTTCGT CGGCGACGGC CCCCACCCCG CAGTCGACCA CCCCGGTGGA GATGGCTGCT
CCGGCTCTTG CCGAGCGCCC CGCCACCGTC TGCCGCGCCC TGCTCTCCCA ACTTCCGTCG
GCGATCCGGG ATCTGCCGCA GCGGCCGGTC ACCGCCGGCC CCGAGCAGAA CGCCGCGTAC
GGTGATCCGG CCCTCACCGT CGCCTGCGGC GGCACGGCGC CGACCTTCGC CGACACCGAC
AAGCTCTGGT TGGTCAACCG GGTCTGCTGG TATGGCAGCG AAGAGGAGGG CAACACCGTG
CTGAGTACCG TCGACCGGGA GACGACGGTC ACGGTCCGGG TGCCCGACGG CTACGACCAA
CCACTCCAGT GGGTCTCCCC CGTCTCGGAG ACGATCATCG CGACGGTCCC CTCCGCCGAC
GACGCCCCAA CGGGCTGCCG CCCCGAGTAG
 
Protein sequence
MSRLPDSSKS TTARDDASAP ADDTVARQEA ADGSERSRKG GRDRSNRGAA LIATAVALPA 
TVLAGVLAFN QFAPDQPESE PSSSATAPTP QSTTPVEMAA PALAERPATV CRALLSQLPS
AIRDLPQRPV TAGPEQNAAY GDPALTVACG GTAPTFADTD KLWLVNRVCW YGSEEEGNTV
LSTVDRETTV TVRVPDGYDQ PLQWVSPVSE TIIATVPSAD DAPTGCRPE