| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1272 |
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| Symbol | |
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| ID | 5057725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 1433140 |
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| End bp | 1434246 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640473544 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_001158120 |
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| Protein GI | 145593823 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.390278 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCACCC CAGGCAAGAT CCGCGTGGCG GTCGTGTTCG GCGGACGCAG CCCGGAGCAC
GGCATTTCCT GTGTCAGCGC CGGTAGCGTG CTGGCGGCGC TCGACCCCGA CGAATACGAG
GTCGTGCCGG TAGGGATCAG CCGTGCCGGT CAGTGGGTGC TGACCGGCAG CGATCCGGCC
GAGCTCGCGA TCAGCGCCCG CCGGTTGCCG GAAGTCACCG CCGAGTCCGG CGCCGCCATC
ATGCTCAATG CTGACCCGAG CCACAGCGGG CTGATGGTGC TCGACGCGAC CGCGGGGCCC
CGGGCCCTCG CCGACGTGGA CGTGGTGTTT CCGGTCCTGC ACGGAGCGTA CGGGGAGGAT
GGCAGCATTC AGGGGATGCT GGAGATGGCC GGCATCCCGT ACGTGGGGGC GAACGTCTTC
GCCTCCGCCG CCGCCATGGA CAAGGAGTTC ACCAAGAAGC TCTGCGCCGC CGAGGGGATT
CCGATCGGCC CGTACGTGGT GCTGCGCAGC GGCATGACCT TGACCGAGCA GGACAAGCAG
CGCCTGGGTC TACCGGTCTT CGTCAAGCCC TCCCGGGCCG GCTCGTCCTT CGGGATCACC
AAGATCAGCG ACTGGGCGGA GCTGGACGCT GCGGTCGCCA CCGCCCGGCA GATCGACTCC
AAGGTCCTCG TCGAGGCCGC GGTTGTCGGC CGGGAGATCG AGTGCGGAGT GTTGGAGGGC
GAGGCCGGTG GGGTGCCGGA AGCGTCCGTG CTCGCCGAGG TCCGGGTGGT CGGGGAGTAC
GACTTCTACG ACTTCGAGGC GAAGTACATC GATGCCGAGT CCGCCTGTGA GTACGACATC
CCCGCCGGTC TGTCGGAGCG GGTGACCCGC CAGGTCCAGG AGTACGCGGT CCGTGCGTTC
ACCGCGCTCG ACTGCGCCGG GCTGGCTCGG GCTGACTTCT TTGTCACCCC GGAGTTGGAC
ATCTATCTCA ACGAGATCAA CACGATGCCC GGCTTTACCC CGTCATCGAT GTTCCCGCGC
ATGTGGGCGG CCTCCGGTCT GGAGTACCCG AAGCTGGTCA ACCGCCTTAT CCGTACCGCC
CTTCAGCGCG GGGCCGGCCC GCGCTGA
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| Protein sequence | MTTPGKIRVA VVFGGRSPEH GISCVSAGSV LAALDPDEYE VVPVGISRAG QWVLTGSDPA
ELAISARRLP EVTAESGAAI MLNADPSHSG LMVLDATAGP RALADVDVVF PVLHGAYGED
GSIQGMLEMA GIPYVGANVF ASAAAMDKEF TKKLCAAEGI PIGPYVVLRS GMTLTEQDKQ
RLGLPVFVKP SRAGSSFGIT KISDWAELDA AVATARQIDS KVLVEAAVVG REIECGVLEG
EAGGVPEASV LAEVRVVGEY DFYDFEAKYI DAESACEYDI PAGLSERVTR QVQEYAVRAF
TALDCAGLAR ADFFVTPELD IYLNEINTMP GFTPSSMFPR MWAASGLEYP KLVNRLIRTA
LQRGAGPR
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