| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1256 |
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| Symbol | |
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| ID | 5057706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 1418018 |
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| End bp | 1418821 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640473525 |
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| Product | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase |
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| Protein accession | YP_001158104 |
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| Protein GI | 145593807 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.29455 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.143431 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGTATCG CTCGTTTCGC TCATACCAAG GGAATGTCGT TCGGGGTCGT CGAGGGGGAG
CCGGAGGCGG GTCCGCAGGG GCTGACCGTC GCCGAGGTCG AGGGGCATCC GTTCGGACGG
ATCAGCTTCT CCGGCGCCCG GTGGGCCCTC TCCGATGTTC GCCTGCTCTC GCCGATCCTG
CCGAGCAAGG TTGTCTGCGT CGGCCGCAAC TACGCCGAGC ATGCGGCGGA GCACGGCACG
GAGGTGCCCC AGGAGCCGTT GCTCTTCCTC AAGCCGTCGA CCTCGGTGAT CGGACCGCGG
GACGCGATCC GGCTGCCGGC GCTGTCGAAG CAGGTCGAGC ATGAGGCCGA GCTGGCCGTG
GTGATCGGGG CACCCGGTGC CCGGCGTGCC GATCGGGCCG CCGCCGCGCG CGCGGTCTTC
GGCTACACCT GCGCCAACGA TGTGACGGCA CGGGACCTGC AACGGGCGGA CGGGCAGTGG
ACCCGGGCCA AGGGCTTCGA CTCGTTCTGC CCGATCGGTC CCTGGATCAC CACCGGCCTC
GACGTCGCCG ACCTGGAGAT CCGGTGTGAG GTGGGTCGCG ATCCGGAGGA GATGGAGGTC
CGCCAGCTGG GCCGGACCCG GGACATGGTC TTCGACGTAC CGGCCCTGGT GTCGTACGTC
TCACATGTGA TGACGCTGCT CCCGGGTGAT GTGATCCTGA CCGGCACGCC GGCCGGGGTT
AGTCCGCTCG TGGACGGGGA TACGGTCACC GTACGGATCG AGGGGGTCGG CGAGCTGACC
AATCCGGTGC TGCCGGCCAG CTGA
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| Protein sequence | MRIARFAHTK GMSFGVVEGE PEAGPQGLTV AEVEGHPFGR ISFSGARWAL SDVRLLSPIL
PSKVVCVGRN YAEHAAEHGT EVPQEPLLFL KPSTSVIGPR DAIRLPALSK QVEHEAELAV
VIGAPGARRA DRAAAARAVF GYTCANDVTA RDLQRADGQW TRAKGFDSFC PIGPWITTGL
DVADLEIRCE VGRDPEEMEV RQLGRTRDMV FDVPALVSYV SHVMTLLPGD VILTGTPAGV
SPLVDGDTVT VRIEGVGELT NPVLPAS
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