Gene Strop_1255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1255 
Symbol 
ID5057705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1416533 
End bp1417852 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content75% 
IMG OID640473524 
Producthypothetical protein 
Protein accessionYP_001158103 
Protein GI145593806 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.249297 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCAT CGACACGACA CCACAGGGCC CTCGCAGTGC TCGTCTACTG CCTCGGCATC 
CTCGCCGCTG TGCCGGCGCT ACCCGGCCCG GCCGCCGCGC AGCAGCCGGC CGCCCGACCG
CCGGCCCCGC CCGGGGCGGC CACCGCGCCG GCCGGCCAGC CGTCCGCGGA GGCCAGCGAG
GAGCCGGGCC GACCATCCGC GCCGCCAGCG CTGCCGAGCC CGACCCAGGC GGCGGTCCCA
CCACCGAAAC CGCCGATCAC CGTACAGGTC GCGCCGGAGA ACACACCCGC GCCGAGATAC
CGGATCCAGG TCCGCAACGA CGGAAGCCGG CCGATCGCCA CCACCGTCCG TCAGGAGCTC
CCGCCGGGCA CCTCGGCGAC CTCGATCACC GACGGCGGCC GGCCCAGCCA CAACGGCGGG
AATGCCGGGA CAGAGGTCAC CTGGAACCTG CGGCTGCCCG CCCGGAGCAC CACCACGCTC
AGAACCGAGC TCACCGCGCC ACCGGGTGAG CCCCTGACCG CGCCCGCCTG CGCCTTCGCC
ACCGGCGGCG AGCGCCCGTA CGACTGCGCT ACCGCGACCT GGCAATCCGA ACCGGCGCCA
GCGGCGGCCG AACCGGAACC GCCGGTGTGG CAGCAGCCGG CTGCCCTGCT CACCGGCCTC
GGTGGACTCG CCGCACTCGC CGTCGGCGGC TGGTGGACCT GGCAGCGGCG GCGGCGCCCA
GCGCAGCTCC CGCCGCCTCA CCAGGGGGGT CGAGGGACCG TCTACCCGCG GCCGGCGGCA
CCGACCACTC CGACACGCCG CCGCCGACCC TCGACCTGGC TACTCGTCCC GGTCGCCGCG
GTGGTGCTGG CCGGCACCGT GGGCACAGCG ACCTGGACGG CCACCCGGAA GGCCGCTGCC
GTCGACACCG ACTCCCATCC CACCAGCGGC GCCTGGATCG GCACCGGAGC CGCCGGCGCG
ATCGGGGAAC CGCTCCGCGA GGCGGCGTTC GAGTTCACCG TCTACCGGGT CAGCTGCCAA
CCGGCCTCGG GGGCACACAC CTGCGCCGCG ACCGTCGGGG TCCACAACCT CACGCCGGAA
CAGCAGAGCT GGCACGGCCC ACTCCAACGG GCGTACCTCG CCGACGGCGA CTTTGTCAGC
ACCGACGAGC AGGAGACCCG CCGGGCGAAC CAGGGCCGGG ACGTGTTCGC CAAGCCATTG
GCCGGCGGCA GCCGAATGGT CCTCCCGCTG GTCTTCACCG TGCACGGCCA GCAGCCCCCG
ACCCAACTCG AGCTACGCAG TGGGGTGTTC TCCGCCGGGG TTCGGGTGGA CGTGCCCTGA
 
Protein sequence
MPASTRHHRA LAVLVYCLGI LAAVPALPGP AAAQQPAARP PAPPGAATAP AGQPSAEASE 
EPGRPSAPPA LPSPTQAAVP PPKPPITVQV APENTPAPRY RIQVRNDGSR PIATTVRQEL
PPGTSATSIT DGGRPSHNGG NAGTEVTWNL RLPARSTTTL RTELTAPPGE PLTAPACAFA
TGGERPYDCA TATWQSEPAP AAAEPEPPVW QQPAALLTGL GGLAALAVGG WWTWQRRRRP
AQLPPPHQGG RGTVYPRPAA PTTPTRRRRP STWLLVPVAA VVLAGTVGTA TWTATRKAAA
VDTDSHPTSG AWIGTGAAGA IGEPLREAAF EFTVYRVSCQ PASGAHTCAA TVGVHNLTPE
QQSWHGPLQR AYLADGDFVS TDEQETRRAN QGRDVFAKPL AGGSRMVLPL VFTVHGQQPP
TQLELRSGVF SAGVRVDVP