Gene Strop_1252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1252 
Symbol 
ID5057702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand+ 
Start bp1413947 
End bp1414552 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content67% 
IMG OID640473521 
Productregulatory protein, TetR 
Protein accessionYP_001158100 
Protein GI145593803 
COG category[S] Function unknown 
COG ID[COG3226] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.409819 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.484115 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTGAGA CCAGCATCGA ACGGGGCCGG AACGCGCGAG CGCGCCTGGT GGCGGCCGCC 
CGAGAGCTGA TCGGCGAGCT CGGTTGGAAC GCCGTCAGTA CCCGGACGCT GGCCGAGCGG 
GCTGGTGTCC GCTCAGGGCT GGTGCACTAC CACTTCGACT CGTTACAGGC GCTCCTGCGC 
CACGCCGCCC TCGATGAGGT CCAACGGATG CTCGACGGCA CCAGGGCGCT CCTTGCCGGG 
GCCACGAGCC CGAGCGACGA CATCGAGCGG ATGTTGTTCG ACCTCGACCA GTACAACGGC 
TCTGATCCGG CTTCCCTGCT GTTCGTCGAG ACCTATCTCG CCGCAACCCG CGACCACGAG 
CTGCGCCAGG GGATGGGTGC GCTGGTCGCC GACTTCCGTC GCTCGCTGAC CGAGGCGCTC 
ACCCGCTCCG GGCACCCCAG ACCGGAGGCC GCCGCGAGCA TGGTATTGGC GTTCTTCGAC 
GGCTTTGTCC TGCACAAGGG CCTCGACCAG GGCCTGTCGG CGGAGCATAT CGCCCCGCTG 
CTGCGCCGAA TCACCAACAC CGAAGAGAGC CGAATCACCA ACACCGAAGA GAACGGAGAA 
CAGTGA
 
Protein sequence
MGETSIERGR NARARLVAAA RELIGELGWN AVSTRTLAER AGVRSGLVHY HFDSLQALLR 
HAALDEVQRM LDGTRALLAG ATSPSDDIER MLFDLDQYNG SDPASLLFVE TYLAATRDHE 
LRQGMGALVA DFRRSLTEAL TRSGHPRPEA AASMVLAFFD GFVLHKGLDQ GLSAEHIAPL 
LRRITNTEES RITNTEENGE Q