Gene Strop_1251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1251 
Symbol 
ID5057701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1412859 
End bp1413917 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content72% 
IMG OID640473520 
Producthypothetical protein 
Protein accessionYP_001158099 
Protein GI145593802 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.634667 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.755858 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGACCAA ATCCTACACG GGATGCGCAA GATCAGTACC CCTCGCCGCC CCAGCAACCG 
GGTGTGGGCA AGCCTGGGCC CGGTAGCGGC AGAGTGCGTC GTGGCCTCAC CGCGGGTAGA
CACACTCGGA CCCAAAAGCG GGCACGGCCG TACCCTGGGC AGGTGACGAC CGCCCTCCCC
GCACTCGGCA CCGTGCTCGA AACGGCGACC TGGCAGGCCC GACGCCAGGC GCACCAGGAG
CGGATCGACG CGTGGCTGGC CCCACACCTG GCCCGCCGCC GCCGGGGCGA GAAGCATCCG
GTGCAGGACT TCCTCTTCAC CTACTACTCG TACCGGCCGG CCCGGCTCCG CCGCTGGCAT
CCGGGCGCGG GGGTGGTGCT ACGCGACGCG GACCCGGCCG ACTTCGGGCC GGACTACCGC
GCCAGCACCG CCGGCGCCAC CCTCGACACC CCGGCGGTAC GCGCCCGGCG GGCCGAATCG
ATCACGTGGA TCCGGACCCT GTTGACGGCC ACCGCGGGCC GACCGGCACA GTTCGGCTGC
TTCGGCATGC ACGAGTGGGC GATGGTCTAC CGGCAGACCC AGGACGAGGT CCGACACAAC
GCCTGGCCGC TGCGGTTGAG CCCGGAGCGG GTCGCCACGG TCGTCGAAGA GCGGGGAGTG
CGGTGCAGCC ACTTCGACGC GTACCGCTTC TTCACCCGGC CAGCCCGGCC GCTGAACCTC
CTGCACCCGA CCCGGGACAG CCAGCACGAC CTGGAGCAGC CCGGCTGTCT GCACGCCAAC
ATGGATCTCT ACAAGTGGGC GTACAAACTC TCCCCGCTGG TTCCATCCGA GCTGGTGGGG
GATTGCTTCG AGCTGGCGGG ACAGATCCGC GCCCTCGACA TGCGCGCCTC GCCGTACGAC
CTGGCCGCGC TGGGCTACCC GCCGGTTGCG GTCGAGACCC CACCGGGGCG CACGGAGTAC
GCCGCCGCCC AGCGCGGCTT CGCCGAACGG GCCGCCCGGC TGCGCACCCG GCTCCTCGAC
GCGATTGACA GGTGCGACAG GCAACGGCGG CTGTGGTAG
 
Protein sequence
MRPNPTRDAQ DQYPSPPQQP GVGKPGPGSG RVRRGLTAGR HTRTQKRARP YPGQVTTALP 
ALGTVLETAT WQARRQAHQE RIDAWLAPHL ARRRRGEKHP VQDFLFTYYS YRPARLRRWH
PGAGVVLRDA DPADFGPDYR ASTAGATLDT PAVRARRAES ITWIRTLLTA TAGRPAQFGC
FGMHEWAMVY RQTQDEVRHN AWPLRLSPER VATVVEERGV RCSHFDAYRF FTRPARPLNL
LHPTRDSQHD LEQPGCLHAN MDLYKWAYKL SPLVPSELVG DCFELAGQIR ALDMRASPYD
LAALGYPPVA VETPPGRTEY AAAQRGFAER AARLRTRLLD AIDRCDRQRR LW