| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1243 |
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| Symbol | |
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| ID | 5057693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 1404748 |
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| End bp | 1406367 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640473512 |
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| Product | putative alpha-isopropylmalate/homocitrate synthase family transferase |
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| Protein accession | YP_001158091 |
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| Protein GI | 145593794 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00977] 2-isopropylmalate synthase/homocitrate synthase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.415468 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGGGGTC TTTTTGTTGC CGCAGAGAGG ATCCTGATGA CCTTCCAGGT CTACGACACG
ACCTTGCGCG ACGGTGCCCA GCGCGAGGGG CTCAGCTATA CGGTGGCCGA CAAACTCGCG
GTGGCCCGGC TTCTCGACGA GTTCGGTGTG GGCTTCATCG AGGGAGGGTG GCCGGGCGCG
GTACCGAAGG ACACCGAGTT CTTCCGCCGG GCCCGCGCCG AACTCGACCT GCGCCACGCG
GTGCTGGTGG CCTTCGGCGC CACCCGTCAC GCCGGCCGAA AGGTCGACGA CGATCCGCAG
GTGCGCAGCC TGCTCGCCGC CGAGACCCCC GCCGTCACGT TGGTCGCCAA GGCCGACCTG
CGGCACGTGC AGCGGGCCCT ACGTACCTCC GCCGACGAGA ACCTGGCGAT GGTCCACGAC
ACCGTGACGT ACCTGGTGGC GCAGGGACGG CGGGTCTTCG TCGACGGGGA ACACTTCTTC
GACGGCTACC GTGACGACCC CGGGTACACC GCGTCGGTGG CGCAGACCGC GCTCGCCGCT
GGCGCTGAGC GGTTCGTGCT CTGCGACACC AACGGTGGCA TGCTCCCCTC CCAGGTCACC
GCCGTGATCG CCGACCTCAC CGCCCGGCTC GGTGTCGCGC CCGGGCAACT CGGCATCCAC
ACCCAGGACG ACACCGCCTG CGCGGTGGCC AACACCATCG CCGCGGTGGA GGCGGGTGTG
CGGCACGTGC AGGGCACGGC CAACGGATAC GGCGAGCGAC CCGGGAACGC CGACCTCTTC
GCCGTGGTGG CGAACCTTCA ACTCAAGCTT GGATTCCCGG TCGTACCCGA GGGCTGCCTG
GAACAGATGG TGCGGGTGTC CCGCGGCATC GCCGAGCTGG CCACCATCGC TCCTGACGAC
CACCAGGCGT ACGTCGGGGC TGCGGCCTTC GCCCACAAGG CGGGGCTGCA CGCGAGTGCG
ATCAAGGTGG ATCCGTTGTT CTACAACCAC GTGGACCCGC AGCTGGTGGG AAACCGCATG
CGCATCCTCG TCACCGAAAT GGCCGGCCGG GCCAGCGTCG AACTCAAGAG TCGGGAGCTG
GGCCTCGACC TGACCGACCA CCCGGAGACC CTGAACCGGG TCACCAAGCG GGTCAAGGAG
CTGGAGGCTG AGGGCTGGTC GTTCGAAGCG GCCGACGCCT CCTTCGAGCT GCTGGTCCGT
TCCGAACTGC CCGACGCGGC GCCGCCACGA CCGTTCACGC TCGAGTCCTA CCGCATCCTG
GTCGAGCACC GCGAGGACGG CGCGGTGGTC TCCGAGGCGA CCGTCAAGAT CCGCGTACGC
GGTGAGCGGG TGATCGCCAC CGCGGAGGGG AACGGCCCGG TGAACGCGCT CGACGAGGCG
CTGCGCGTCG GCCTCGCCAA GCACTACCCC GAGTTGCGTG ACTTCGAGTT GGCCGACTAC
AAGGTGGGGA TTCTGGCCGG CAGCCACGGC ACCGGGGCGG TGACCCGGGT GCTGGTGGAG
ACGTCGGACC ACACTGGTCG GGACTGGACC ACGGTGGGCG TGCATCCCAA CGTGGTGGAG
GCAAGTTGGG ACGCGCTGGT TGACGCCCTG ACCTACGGGC TGGACCGGGC TCGGGGCTGA
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| Protein sequence | MGGLFVAAER ILMTFQVYDT TLRDGAQREG LSYTVADKLA VARLLDEFGV GFIEGGWPGA
VPKDTEFFRR ARAELDLRHA VLVAFGATRH AGRKVDDDPQ VRSLLAAETP AVTLVAKADL
RHVQRALRTS ADENLAMVHD TVTYLVAQGR RVFVDGEHFF DGYRDDPGYT ASVAQTALAA
GAERFVLCDT NGGMLPSQVT AVIADLTARL GVAPGQLGIH TQDDTACAVA NTIAAVEAGV
RHVQGTANGY GERPGNADLF AVVANLQLKL GFPVVPEGCL EQMVRVSRGI AELATIAPDD
HQAYVGAAAF AHKAGLHASA IKVDPLFYNH VDPQLVGNRM RILVTEMAGR ASVELKSREL
GLDLTDHPET LNRVTKRVKE LEAEGWSFEA ADASFELLVR SELPDAAPPR PFTLESYRIL
VEHREDGAVV SEATVKIRVR GERVIATAEG NGPVNALDEA LRVGLAKHYP ELRDFELADY
KVGILAGSHG TGAVTRVLVE TSDHTGRDWT TVGVHPNVVE ASWDALVDAL TYGLDRARG
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