| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1240 |
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| Symbol | |
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| ID | 5057690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 1402228 |
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| End bp | 1403325 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640473509 |
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| Product | branched-chain amino acid aminotransferase |
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| Protein accession | YP_001158088 |
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| Protein GI | 145593791 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR01123] branched-chain amino acid aminotransferase, group II |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.550522 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGTG GTGACAAGCT CGAGTTCGAG ATCCGTCCGA ATTCCGCGCC GGTATCCGCA
GCGGACCGGG CCGCGCTGCT GGCGAACCCG GGCTTCGGGC GGGTTTTCAC CGACCACATG
GTCACTATCC GCTACGCCGC TGGGAAGGGC TGGTACGACG CGCGGGTCGA GGCGCGGGCG
CCGATCCCGA TGGACCCGGC CGCTGCGGTC CTGCACTACG CCCAGGAGAT CTTCGAGGGC
ATGAAGGCGT ACCGCACCGC CAGCGGTGGC GTGACGATGT TCCGGCCGTA CTCCAACGCC
GTCCGGTTCG CCGCGTCCGC CCAGCGAATG GCGATGCCCA CCCTGCCCGA GCAGACCTTC
GTCGACTCGC TGCGCCGGCT GATCGAGGTG GACCGGGACT GGATTCCCGA GGGGGAGGAC
GGCAGCCTCT ATCTGCGGCC GTTCATGTTC GCCAGCGAGG TCTTCCTCGG GGTGCGTCCC
GCCAACGAAT ACCTGTACGC GGTGATCGCG TCCCCGGTCG GTGCGTACTT TTCTGGTGGG
GTGAAGCCGG TCACCGTTTG GGTCTCGCCG GACTACACGC GAGCCGCGCC CGGGGGCACC
GGCGCTGCCA AGTGCGGCGG CAACTACGCC AGTTCGCTGG TCGCCCAGGC AGAGGCGATC
GAGCACGGCT GCGACCAGGT CGTCTTCCTG GACGCGGTGG AGCGCCGCTT CGTTGACGAA
CTGGGCGGCA TGAACCTCTT CTTCGTCTAC GACGACGGCA CCCTGGTCAC CCCGCCCCTG
ACCGGGACCA TCCTGCCCGG CATCACCCGG GAGTCGGTGC TCACGCTCGC TGCCGCCGCC
GGCCACCGGG TGGCGGAGCA TCCGATCTCG TTCGCCGACT GGCAGACCGA CGCGGCGAGC
GGTCGGCTGC GCGAGGTCTT CGCCTGCGGC ACGGCCGCGG TGATCAATCC GGTCGGGACG
GTGCGCTCTG CCGACGGTGA GTTCCGTGTC GGTGGCGGTG AGCCCGGCCC GGTCACCATG
GCCCTACGCC AGCAACTCGT CGACATCCAG CGGGGTAAGG CCGCGGATCC GCAGAACTGG
GTCTACCGCG TGCTCTGA
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| Protein sequence | MSGGDKLEFE IRPNSAPVSA ADRAALLANP GFGRVFTDHM VTIRYAAGKG WYDARVEARA
PIPMDPAAAV LHYAQEIFEG MKAYRTASGG VTMFRPYSNA VRFAASAQRM AMPTLPEQTF
VDSLRRLIEV DRDWIPEGED GSLYLRPFMF ASEVFLGVRP ANEYLYAVIA SPVGAYFSGG
VKPVTVWVSP DYTRAAPGGT GAAKCGGNYA SSLVAQAEAI EHGCDQVVFL DAVERRFVDE
LGGMNLFFVY DDGTLVTPPL TGTILPGITR ESVLTLAAAA GHRVAEHPIS FADWQTDAAS
GRLREVFACG TAAVINPVGT VRSADGEFRV GGGEPGPVTM ALRQQLVDIQ RGKAADPQNW
VYRVL
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