| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1234 |
|---|
| Symbol | ilvH |
|---|
| ID | 5057684 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 1395640 |
|---|
| End bp | 1396149 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640473503 |
|---|
| Product | acetolactate synthase 3 regulatory subunit |
|---|
| Protein accession | YP_001158082 |
|---|
| Protein GI | 145593785 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0440] Acetolactate synthase, small (regulatory) subunit |
|---|
| TIGRFAM ID | [TIGR00119] acetolactate synthase, small subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.354058 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATACGC TCTCCGTGCT TGTGGAGAAC AAGCCCGGGG TCCTGGCCCG GGTGTCCGGG
CTGTTCTCCC GGCGCGGCTT CAACATCGGC AGTCTGGCGG TCGGAGAGAC CGAGAATCCA
GATGTCTCCC GGATCACCAT CGTGGTCAAC GCTGAGTCGT CTCCGCTGGA GCAGGTCACC
AAGCAGCTCA ACAAGTTGGT GAACGTCATC AAGATCGTTG AGCTGGACGC CCAGGTGTCG
GTGGCCCGGG AGTTGCTGCT GGTCAAGGTC CGCGCCGACC GCAGCGCCCG TGGTCAGGTG
CTGGAGACGG TGAACCTGTT CCGAGCCCGG GTCGTCGACG TCGCACCGGA CACGCTGACC
GTCGAAGCGA CCGGCACTGC GGACAAGTTG GCTGCTCTGC TCCGGGACCT CGAGGCCTTC
GGAATCAAGG AGATGGTGCA GTCCGGCACG GTCGCGATCG GCCGTGGGTC CCGCTCCATC
ACCGCCGGTC CGGCGCTTCG GGCCGCCTGA
|
|---|
| Protein sequence | MHTLSVLVEN KPGVLARVSG LFSRRGFNIG SLAVGETENP DVSRITIVVN AESSPLEQVT
KQLNKLVNVI KIVELDAQVS VARELLLVKV RADRSARGQV LETVNLFRAR VVDVAPDTLT
VEATGTADKL AALLRDLEAF GIKEMVQSGT VAIGRGSRSI TAGPALRAA
|
|---|
| |