| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1233 |
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| Symbol | |
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| ID | 5057683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 1393689 |
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| End bp | 1395572 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640473502 |
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| Product | acetolactate synthase 1 catalytic subunit |
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| Protein accession | YP_001158081 |
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| Protein GI | 145593784 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.463621 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAGAC CCACACCCGA GACCCTCGCC AACTCCGCCC GGCGGGCCCG TGCGGCCGTC
GAGCAGCCCC GCGACACCGA CCGACCCCGC GGAGCGGCCA CCCCGACCGT TCCGGCGGTA
CGCACCCCTG CCCCCGCCCC CGCCCAGGTC TCCGGTGCCG GCTCCCTCGT GCGATGCCTT
GAAGCGCTCG GCGTCGATGT CATCTTCGGC ATTCCCGGCG GCTCGATCCT GCCGGCGTAC
GACCCGTTGT ACGACTCCAC GGTCCGGCAC ATCCTGGTCC GGCACGAGCA GGGCGCCGGG
CACGCGGCCA CCGGGTACGC GCAGGCGACC GGGCGGGTCG GCGTCTGCGT CGCCACCTCC
GGGCCCGGTG CGACCAACCT GGTGACGCCG ATAGCCGACG CGTACATGGA TTCAGTGCCG
CTGGTGGCGA TCACCGGCCA GGTCGCCCGG CCGTCGATCG GCACGGACGC CTTCCAGGAG
GCGGATATCC AGGGCATCAC GCTGCCGATC ACCAAGCACA ACTTCCTGGT TCAGAGCGCC
GAGGAGCTGC CCCGGGTGCT CGCCGAGGCG TTCCACCTCG CCGCAACCGG CCGGCCCGGC
CCCGTTCTGG TGGACATCCC CAAGGACGTC CTCCAGGCGT CGACCGTCTT CACCTGGCCG
CCGACGCTCG ACCTGCCCGG CTATCGGCCG ACGCTGCACC CGCACGGTAA GCAGATCCGG
GAGGCGGCCC GGCTGATGGC CATCGCCCGC CGGCCGGTGC TCTACGTCGG TGGTGGCGTG
CTCAAGGCCG GCGCGACCGA CGGGCTGCGC CAGCTCGCCG AACTGACCGG GATCCCGGTG
GTCACCACCT TGATGGCGCT CGGCGCGTTC CCCGACTCAC ACCCGCAGCA CCTGGGCATG
CCCGGCATGC ACGGGACGGT CGCGGCGGTC TACGGTCTCC AGAAGGCGGA TCTGATCATC
GCGTTGGGGG CGAGGTTCGA CGACCGGGTG ACCGGCCAGC CGGACTCGTT CGCTCCCGAC
GCGACCGTGG TGCACGCCGA CATCGACCCG GCCGAGATCG GCAAGAACCG GCACGCGGAC
GTGCCGATCG TGGGGGATGC CCGGCACGTC ATCGACGAAC TGGTCGGCGC GGTCACCGTC
GAGCAGTCTG CCGGCCACCG GCCCGACCTC GACGACTGGT GGTCCCAACT GCAGGAGCTG
CGCAAGCGCT ACCCAGTGGG GTACGAGGAG CCGGCCGACG GCACGCTTTC CCCGCAGTAC
GTGCTCAGCC GGCTCGGCGA GATCGTCGGC CCGGAGGCGG TGTATGTGGC GGGCGTGGGC
CAGCACCAGA TGTGGGCTTC CCAGTTCATC TCGTACGAGA AACCGCGCAC GTGGTTGAAC
TCCGGCGGCC TCGGCACCAT GGGGTACGCG GTGCCGGCGG CGATGGGTGC CAAGGTCGGC
CGGCCGGAGA CGGTGGTCTG GGGGATCGAC GGCGACGGCT GCTTCCAGAT GACCAGCCAG
GAGCTGGCGA CCTGCGCGTT GGAGGGCATC CCGGTCAAGA TTGCTGTGAT CAACAATGGC
AATCTCGGCA TGGTGCGACA GTGGCAGGCA CTGTTCTACG GGGAGCGCTA CTCCAACACC
GACCTCGGTA CGCACAAGCA TCGCATTCCG GACTTCGTCA AGCTCGCCGA GGCGCTGGGC
TGCGTCGGGC TGCGCTGCGA GACGGCGAAG GACGTCGACA AGACGATCGA GGCGGCGATG
TCCATCAACG ATGCCCCGGT GGTCATCGAC TTCGTGGTCG GCAAGGACGC CATGGTGTGG
CCGATGGTCG CCGCCGGGAC CAGCAACGAC GAGATCATGT TTGCCCGTGG TGTCCGGCCG
GTCTTCGACG AGGATGACGT CTAG
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| Protein sequence | MTRPTPETLA NSARRARAAV EQPRDTDRPR GAATPTVPAV RTPAPAPAQV SGAGSLVRCL
EALGVDVIFG IPGGSILPAY DPLYDSTVRH ILVRHEQGAG HAATGYAQAT GRVGVCVATS
GPGATNLVTP IADAYMDSVP LVAITGQVAR PSIGTDAFQE ADIQGITLPI TKHNFLVQSA
EELPRVLAEA FHLAATGRPG PVLVDIPKDV LQASTVFTWP PTLDLPGYRP TLHPHGKQIR
EAARLMAIAR RPVLYVGGGV LKAGATDGLR QLAELTGIPV VTTLMALGAF PDSHPQHLGM
PGMHGTVAAV YGLQKADLII ALGARFDDRV TGQPDSFAPD ATVVHADIDP AEIGKNRHAD
VPIVGDARHV IDELVGAVTV EQSAGHRPDL DDWWSQLQEL RKRYPVGYEE PADGTLSPQY
VLSRLGEIVG PEAVYVAGVG QHQMWASQFI SYEKPRTWLN SGGLGTMGYA VPAAMGAKVG
RPETVVWGID GDGCFQMTSQ ELATCALEGI PVKIAVINNG NLGMVRQWQA LFYGERYSNT
DLGTHKHRIP DFVKLAEALG CVGLRCETAK DVDKTIEAAM SINDAPVVID FVVGKDAMVW
PMVAAGTSND EIMFARGVRP VFDEDDV
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