Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1229 |
Symbol | |
ID | 5057679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 1387277 |
End bp | 1388722 |
Gene Length | 1446 bp |
Protein Length | 481 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640473498 |
Product | hypothetical protein |
Protein accession | YP_001158077 |
Protein GI | 145593780 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0257494 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.865842 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCGCAA GGAGATTCAC CAACCGCGGG TGGTGGGCAC AGGGCCCGGT ACGCGCCGCC GCCCTGACCG GAGTTGTCGG GTTGTCCGGG GTCGCGGTCA CCGGGACCGG CGCACCGCCG GTGCTGGCCG GTGACACGAA GGCCGAGCAG AGGCCCGGGG CTGTCGCCGA CAACCACCCA GGGCGCTCCG CACAGTGGGG GGAGACAGGA GGTGGCGAGT GGGGCGGCGA GTGGGGCACC GCGGGTGCCC CGGAGTGGAA ACCGACAACG GAAGCGCACA GCTCCGACCA CCGCGAACGT CAGGTCCCCT GCGACGCAGA CAGCCTGATC GCGGCGATCA CCGCGGCCAA CACGAACGGC GGCGGGGTGC TCTCGCTGAC CAAGAAGTGC ACCTACACAC TGACCACTGG CGACGGTGGC AACGGCCTGC CACCGGTGGT CCAGCCGATT ACGATCAACG GGAACGGAGC TCGGATCACG CGGGCGGCGA GCGCCGAGGC ATTCCGTATC CTCGACGTTG CCAGCGGCGG GAAGCTGGCG CTGCGGGATC TGGCCGTAAC GAACGGTCGG GCTCCCGATG ACGAGAGCGG CGGCGGAATC CGCGTACAGG AGGGCGCCTC GCTGCGGGTC ACGCGGACGA CCATCGCCGG CAACGTCACG AACGGCCAGA ACGCCGACGG TGCCGGCATC TCCAACCAGG GTGCGACCCA CGTCGAGCGC AGCACCATCA CCGACAACAC CGCCGCTCAG GACGGTGCCG GCCTGTACAA CCTCGGCGGT CTGGTCACAG TGGAAAAATC CAAGATCACC CGAAATATCG CTAGCGATAC CGGCGGTGGC CTCGAGAACG ACGGCGGAGT AACGACGATC TCGCACACCC TGATCCGAGA CAACCGCGCG ACCGCAAGCG GTGGCGGGCT CATCAATCAG GGCAACACGG TGAAGATCTT CCACAGCACG GTTGCGGGGA ACACTGCCGC GATCGGCGGG GGCATCGCGG ACAACAGCGG TGACACCCTG CTGGCCACCG CGGTCACCGT CCGGGGGAAC ACGGCACAGA CCGCAGGCGG CGGGGTAGCG GTCACCGCGT TCAGTGGTGT GACGATCGAC GACAGCGCGA TCACCGACAA CGTCACCACG GCTGGTGACG GTGCCGGAGT ATGGATCGAG GACGATTTCT CCGGCAACAA CATCTCGATC CGCCGGAGTC TGGTCGCCTG GAACCAGGCC GCTGGTGCGG GCGCCCAGGG CGGTGGACTC TATGTCGGCA TCGATGGCAC GGTCGCCCTG ACCGACACTC GGATTGTCGA AAACATCGCC GTTGACCCAC CCGGAGGTGT CTACAACGCG GGGGTGGTCA CGACCACGGG GAAGGTCATC ATCACCGACA ACCGGCCCAC AAACTGTACT GGCAGCCCGC AACCGGTCCC AGGCTGCTTC GGCTGA
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Protein sequence | MSARRFTNRG WWAQGPVRAA ALTGVVGLSG VAVTGTGAPP VLAGDTKAEQ RPGAVADNHP GRSAQWGETG GGEWGGEWGT AGAPEWKPTT EAHSSDHRER QVPCDADSLI AAITAANTNG GGVLSLTKKC TYTLTTGDGG NGLPPVVQPI TINGNGARIT RAASAEAFRI LDVASGGKLA LRDLAVTNGR APDDESGGGI RVQEGASLRV TRTTIAGNVT NGQNADGAGI SNQGATHVER STITDNTAAQ DGAGLYNLGG LVTVEKSKIT RNIASDTGGG LENDGGVTTI SHTLIRDNRA TASGGGLINQ GNTVKIFHST VAGNTAAIGG GIADNSGDTL LATAVTVRGN TAQTAGGGVA VTAFSGVTID DSAITDNVTT AGDGAGVWIE DDFSGNNISI RRSLVAWNQA AGAGAQGGGL YVGIDGTVAL TDTRIVENIA VDPPGGVYNA GVVTTTGKVI ITDNRPTNCT GSPQPVPGCF G
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