Gene Strop_1229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1229 
Symbol 
ID5057679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1387277 
End bp1388722 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content67% 
IMG OID640473498 
Producthypothetical protein 
Protein accessionYP_001158077 
Protein GI145593780 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0257494 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.865842 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCGCAA GGAGATTCAC CAACCGCGGG TGGTGGGCAC AGGGCCCGGT ACGCGCCGCC 
GCCCTGACCG GAGTTGTCGG GTTGTCCGGG GTCGCGGTCA CCGGGACCGG CGCACCGCCG
GTGCTGGCCG GTGACACGAA GGCCGAGCAG AGGCCCGGGG CTGTCGCCGA CAACCACCCA
GGGCGCTCCG CACAGTGGGG GGAGACAGGA GGTGGCGAGT GGGGCGGCGA GTGGGGCACC
GCGGGTGCCC CGGAGTGGAA ACCGACAACG GAAGCGCACA GCTCCGACCA CCGCGAACGT
CAGGTCCCCT GCGACGCAGA CAGCCTGATC GCGGCGATCA CCGCGGCCAA CACGAACGGC
GGCGGGGTGC TCTCGCTGAC CAAGAAGTGC ACCTACACAC TGACCACTGG CGACGGTGGC
AACGGCCTGC CACCGGTGGT CCAGCCGATT ACGATCAACG GGAACGGAGC TCGGATCACG
CGGGCGGCGA GCGCCGAGGC ATTCCGTATC CTCGACGTTG CCAGCGGCGG GAAGCTGGCG
CTGCGGGATC TGGCCGTAAC GAACGGTCGG GCTCCCGATG ACGAGAGCGG CGGCGGAATC
CGCGTACAGG AGGGCGCCTC GCTGCGGGTC ACGCGGACGA CCATCGCCGG CAACGTCACG
AACGGCCAGA ACGCCGACGG TGCCGGCATC TCCAACCAGG GTGCGACCCA CGTCGAGCGC
AGCACCATCA CCGACAACAC CGCCGCTCAG GACGGTGCCG GCCTGTACAA CCTCGGCGGT
CTGGTCACAG TGGAAAAATC CAAGATCACC CGAAATATCG CTAGCGATAC CGGCGGTGGC
CTCGAGAACG ACGGCGGAGT AACGACGATC TCGCACACCC TGATCCGAGA CAACCGCGCG
ACCGCAAGCG GTGGCGGGCT CATCAATCAG GGCAACACGG TGAAGATCTT CCACAGCACG
GTTGCGGGGA ACACTGCCGC GATCGGCGGG GGCATCGCGG ACAACAGCGG TGACACCCTG
CTGGCCACCG CGGTCACCGT CCGGGGGAAC ACGGCACAGA CCGCAGGCGG CGGGGTAGCG
GTCACCGCGT TCAGTGGTGT GACGATCGAC GACAGCGCGA TCACCGACAA CGTCACCACG
GCTGGTGACG GTGCCGGAGT ATGGATCGAG GACGATTTCT CCGGCAACAA CATCTCGATC
CGCCGGAGTC TGGTCGCCTG GAACCAGGCC GCTGGTGCGG GCGCCCAGGG CGGTGGACTC
TATGTCGGCA TCGATGGCAC GGTCGCCCTG ACCGACACTC GGATTGTCGA AAACATCGCC
GTTGACCCAC CCGGAGGTGT CTACAACGCG GGGGTGGTCA CGACCACGGG GAAGGTCATC
ATCACCGACA ACCGGCCCAC AAACTGTACT GGCAGCCCGC AACCGGTCCC AGGCTGCTTC
GGCTGA
 
Protein sequence
MSARRFTNRG WWAQGPVRAA ALTGVVGLSG VAVTGTGAPP VLAGDTKAEQ RPGAVADNHP 
GRSAQWGETG GGEWGGEWGT AGAPEWKPTT EAHSSDHRER QVPCDADSLI AAITAANTNG
GGVLSLTKKC TYTLTTGDGG NGLPPVVQPI TINGNGARIT RAASAEAFRI LDVASGGKLA
LRDLAVTNGR APDDESGGGI RVQEGASLRV TRTTIAGNVT NGQNADGAGI SNQGATHVER
STITDNTAAQ DGAGLYNLGG LVTVEKSKIT RNIASDTGGG LENDGGVTTI SHTLIRDNRA
TASGGGLINQ GNTVKIFHST VAGNTAAIGG GIADNSGDTL LATAVTVRGN TAQTAGGGVA
VTAFSGVTID DSAITDNVTT AGDGAGVWIE DDFSGNNISI RRSLVAWNQA AGAGAQGGGL
YVGIDGTVAL TDTRIVENIA VDPPGGVYNA GVVTTTGKVI ITDNRPTNCT GSPQPVPGCF
G