| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1225 |
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| Symbol | |
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| ID | 5057675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 1384119 |
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| End bp | 1385144 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640473494 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
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| Protein accession | YP_001158073 |
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| Protein GI | 145593776 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.273049 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.780161 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGGACC GGGGCGGGCG GCTCGGCCGT GGCGGCTGCC CCGTTCGAGT ACGGTGTCCG
CCCCGCTCGT CGGAGGGCCG CACCGAGGCC CTATCGTCGG CTGGCGTGAA GGTGTGGATT
CCGCATGAGC ACGGCCAGTC TCTGCTCGGT GACCTGCCGG CAGGGGCGAC GGTGGAGGTG
GCGGCGGAGC CGGACCGGCT CCCGTCCCCG GTGGCCGATG TCCGGTTCTG GGTGCCGCCG
TTCCTGGCCG AGGCGAAGAC CGCCGACCTG CTGCGGGAGC TGCCAGACCT GGAGGTGGTG
CAACTCCTGA CCGCTGGTGC GGACGCCTGG GTCGGCCGGA TACCGCCGGG CGTGACGCTC
TGTGACGCGC GCGGGGTGCA CGACTCGGGC ACGTCGGAGT GGGTTGTCGC TGCGATCCTC
GCGCACCTGC GGTCCTTTCC CGCGCATGTT CGGGCGCAGG ACCGTCGGGA GTGGGCGTAC
CGCGAGGTGG CCCCTACCGA CGAGCTGGCC GGCAAGCGGG TGCTGATCGT CGGTGCCGGC
TCGATCGGCA CGGCGCTCAA GGCACGCCTC GCTCCGTTCG AGGTGGGTCT CACCCTGGTG
GCCCGGACCG CGCGGCCCGG CGTGCACGCC GTCACGGAGC TGCCCCGGCT GCTGCCCGAG
GCTGACGTGG TGGTGTTGCT GGTGCCGTTG ACCGAGCACA CCCGGGGGCT GGTGGACGAG
GACTTCCTGG CGGCGATGCG CGACGGCGCC CTGCTGGTCA ACGCGGCGCG GGGGCCGGTC
GCACAGACCA AGGCGCTCGT CGCCGAGCTG GGAACCGGCC GGATCTCGGC CGTGCTGGAC
GTCACCGACC CCGAACCGCT GCCCGCCGAC AACCCGTTGT GGGCGATGCC GAACGTGCTG
CTCACCCCGC ATGTCGCGGG CTCGGTGCAG GGCCTGCTCG CGCGGGCCTA CCGGCTTGTG
GGCGATCAGA TCCGTCGCTA CGCCGCGGGC GAGCCGCCGA CCAACGTGGT GGTGGAGGGC
TACTGA
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| Protein sequence | MADRGGRLGR GGCPVRVRCP PRSSEGRTEA LSSAGVKVWI PHEHGQSLLG DLPAGATVEV
AAEPDRLPSP VADVRFWVPP FLAEAKTADL LRELPDLEVV QLLTAGADAW VGRIPPGVTL
CDARGVHDSG TSEWVVAAIL AHLRSFPAHV RAQDRREWAY REVAPTDELA GKRVLIVGAG
SIGTALKARL APFEVGLTLV ARTARPGVHA VTELPRLLPE ADVVVLLVPL TEHTRGLVDE
DFLAAMRDGA LLVNAARGPV AQTKALVAEL GTGRISAVLD VTDPEPLPAD NPLWAMPNVL
LTPHVAGSVQ GLLARAYRLV GDQIRRYAAG EPPTNVVVEG Y
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