| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1217 |
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| Symbol | |
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| ID | 5057667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 1370566 |
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| End bp | 1372701 |
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| Gene Length | 2136 bp |
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| Protein Length | 711 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640473486 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_001158065 |
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| Protein GI | 145593768 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.554816 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAGG ATGCCATCGG CCAGCAGGTT CCTGCGGCGC AGGAGGCGGC GGCCGGCGCG
GAGCCGAACT CGGCGGCGCG CGAGCGGCAT GCGACGCTCA GCCGGGAGCT GACCGAGCAC
CAATACCGTT ACTACGTGCT CGACGCGCCG ACCATCTCCG ACGCGGCCTT CGATGAGCAG
CTGCGGGAGC TGGCGGCGCT GGAAGCGGAG TTCCCGGCGC TGCGCACGCC CGACTCTCCG
ACGCAGCGGG TGGGGGGCGC CTTCTCCACC GACTTCACCC CGGTGGCGCA CGCCGAGCGG
ATGATGTCGC TCGACAACGC CTTCTCCGAC GAGGAGCTGG CAGCCTGGGC CGAGCGGGTC
GAGCGGGATG CCGGGGGCCC GGTTCCCTAC CTCTGCGAGC TGAAGGTGGA CGGCCTCGCG
ATCAACCTGA CCTACGAGCG GGGGCGTCTG GTGCGGGCGG CCACCCGCGG GGACGGCCGC
ACCGGCGAGG ACGTGACGGC GAATGTCCGT AGCATTCAGG ACGTGCCGGG GGAGCTGACA
CCGTCGGCCG AGTTCCCGGA GATCCCCGAC CTCCTCGAGG TACGCGGTGA GATCTACTTC
CCGGTCGCCG GCTTCGCGGA TCTGAACGCC GGGCTGGTCG AGCAGGGGAG GGCCCCCTTC
GCCAACCCGC GTAACGCGGC CGCCGGTAGC CTGCGGCAGA AGGATCCACG GATCACCGCC
TCCCGCCCGC TGCGGCTGGT GGTGCACGGC TTCGGGGCCC GCCGGGGTTG GGCGCCGAGC
ACCCAGTCCG AGTCGTACGC GGCGTTGCGG ACCTGGGGCC TGCCGACCAG CGATCGGTGG
CGGGTGGTGC CGGGCCTGGC CGGTGTCGCG GAGTACGTCG CGCACTACGC TGCGCACCGG
CACGACGTCG AGCACGAGAT CGATGGCGTG GTGGTGAAGG TCGACCCGGT GGCGATCCAG
GGCCGACTGG GTTCGACGAG TCGGGCACCG CGTTGGGCGA TCGCGTTCAA GTACCCGCCG
GAGGAGGTCA ACACCCGGCT GCTCGATATC GACGTGAACG TCGGGCGCAC CGGCCGGGTC
ACTCCCTTCG CGGTCTTGGA GCCGGTCCGG GTGGCCGGGT CGACGGTCGC GCTGGCCACC
CTGCACAACG CCCGCGAGGT GGAGCGCAAG GGGGTGCTGA TCGGCGACAC GGTGGTGATC
CGTAAAGCCG GTGACGTGAT CCCCGAGGTG CTTGGCCCGG TGGTCGAGCT GCGTCCGCCG
GAGGCCCGGT CGTTCGTGAT GCCGAGCAGG TGTCCGTGCT GCGGCACACC GCTGGCTCCC
GCGAAGGAGG GCGATATCGA CATCCGCTGC CCCAACACGC GGAGCTGCCC GGCCCAGCTC
CGGGAGCGGG TCTTCCACCT CGCCGGGCGG GGGGCCTTTG ACATCGAGGT CCTGGGCTAC
AAGGGGGCCG CCGCGTTACT CGACGCCGAG ATCATCACCG ACGAGGGCGA TCTGTTCACC
CTCGACACCG CGCAGCTGGC GCGGTCCCCG TTCTTCGTCA ACAAGGACGG CAGCCTCGGC
AGCAATGCGG TCAAGCTGCT GGAGAACCTG ACCGTGGCCA AGGAGCGCGA GCTCTGGCGG
GTGCTGGTGG CGCTCTCCAT CCGGCACGTC GGCCCCACCG CGGCGCAGGC CCTGGCCCGG
CACTTCCGGT CGGTCGAAGC GATTGACCAG GCCGGGGAGG AGGAGCTGTC GGCTGTTGAC
GGGGTCGGGC CGACCATCGC GGCGAGCGTT CGGGAGTGGT TCGCCGTGGC CTGGCACCGC
GAGGTGGTGC GCAAGTGGGC CGAGGCCGGG GTGCGGATGG CGGAGGAGGC CGTCGCGCAG
GGGCCGCGCC CGCTGGAGGG GGTGACCGTG GTGGTGACCG GGACGCTCGC CGGCTACTCC
CGGGACCAGG CGGCCGAGGC GATCCAGTCG CGCGGCGGCA AGGTCACCGG CTCGGTCTCG
AAGAAGACCG CCTTTGTGGT GGTCGGTGAC AACCCGGGGA CGAAGGCGGA GAAGGCGGCG
GGCCTGAAGG TGCCGGTGCT GGACGAGGAG GGTTTCCAGG TGCTGCTCGA CGCGGGCCCC
GAGGCGGCGC GGGCGGTGGC CCGGGTCGAG GGCTGA
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| Protein sequence | MSEDAIGQQV PAAQEAAAGA EPNSAARERH ATLSRELTEH QYRYYVLDAP TISDAAFDEQ
LRELAALEAE FPALRTPDSP TQRVGGAFST DFTPVAHAER MMSLDNAFSD EELAAWAERV
ERDAGGPVPY LCELKVDGLA INLTYERGRL VRAATRGDGR TGEDVTANVR SIQDVPGELT
PSAEFPEIPD LLEVRGEIYF PVAGFADLNA GLVEQGRAPF ANPRNAAAGS LRQKDPRITA
SRPLRLVVHG FGARRGWAPS TQSESYAALR TWGLPTSDRW RVVPGLAGVA EYVAHYAAHR
HDVEHEIDGV VVKVDPVAIQ GRLGSTSRAP RWAIAFKYPP EEVNTRLLDI DVNVGRTGRV
TPFAVLEPVR VAGSTVALAT LHNAREVERK GVLIGDTVVI RKAGDVIPEV LGPVVELRPP
EARSFVMPSR CPCCGTPLAP AKEGDIDIRC PNTRSCPAQL RERVFHLAGR GAFDIEVLGY
KGAAALLDAE IITDEGDLFT LDTAQLARSP FFVNKDGSLG SNAVKLLENL TVAKERELWR
VLVALSIRHV GPTAAQALAR HFRSVEAIDQ AGEEELSAVD GVGPTIAASV REWFAVAWHR
EVVRKWAEAG VRMAEEAVAQ GPRPLEGVTV VVTGTLAGYS RDQAAEAIQS RGGKVTGSVS
KKTAFVVVGD NPGTKAEKAA GLKVPVLDEE GFQVLLDAGP EAARAVARVE G
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