Gene Strop_1202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1202 
Symbol 
ID5057652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1354690 
End bp1355586 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content74% 
IMG OID640473471 
Productribokinase-like domain-containing protein 
Protein accessionYP_001158050 
Protein GI145593753 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID[TIGR02152] ribokinase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.744137 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACAGA CCCGGGTGGT CGTCCTGGGC AGCGCCAACA TGGACCTCGT GGCGACCGCC 
GCGACGCTGC CCCGACCGGG GGAGACACTG CTCGGCGCGG ATTTCGTCAT GGTGCCCGGC
GGCAAGGGCG CCAACCAGGC CATCGCGGCG GCGCGGGCCG GCGCGGCCTG TACCTTTCTC
GGTGCCATCG GCTCCGACGC CTTCGGCGTT ACTCTGCGTG CCCGCATCAC CGCGGCCGGA
GTGGACACCG GACACCTGCG GGTCGCGTAC GGTGCCTCCG GGGTCGCCCT GGTGATGGTC
AACGCCGAGG GGGAGAACGC CATCGTGGTC AGTCCCGGCG CCAACGCCAC GATGACCGGG
CTGACCGAGT CGGAGCTGAC GGCCGTACGC GAGGCGGACG TGCTGGTCGC CCAGCTGGAG
ATCCCGGTGG AGACCGTTAC CGAGGCGGCG GTGGCGGCGC GTGCCGCCGG CACCCGCGTG
GTGCTCAACG CCGCGCCGGC CCGGACCGTG CCGGCGGAGC TCTTCGCCGC CACCGACGTG
CTTGTGGTCA ATGAGAGCGA GGCACAGACG TTCACCGGTC ACGGTCGGGA CAAGCCGCAG
GCGCTACTGG AGCTGACCCC CCGGGCGGTG CTCACCCTCG GCGTCTCCGG CGCCTGGTAC
GGCGACCGGG AGGGCGTCCA GGTGCACGTC CCGGCGGTGC CGGTCGAGGC GGTCGACTCG
ACGGCGGCCG GCGACGCGTT CTCGGCAGCG CTTGCGGTCG GCTGGGGCGA GGGGCGCGAG
CTGGTGGACG CGGTGCGGTG GGCGACGGCC GCTGGCGCGG CGTGTGCCCG GCGACTCGGC
ACTTCGGTGG CGTTGCCCCG CCGGGACGAG ATCGACGAGC TGTACCGGCC GGGCTGA
 
Protein sequence
MPQTRVVVLG SANMDLVATA ATLPRPGETL LGADFVMVPG GKGANQAIAA ARAGAACTFL 
GAIGSDAFGV TLRARITAAG VDTGHLRVAY GASGVALVMV NAEGENAIVV SPGANATMTG
LTESELTAVR EADVLVAQLE IPVETVTEAA VAARAAGTRV VLNAAPARTV PAELFAATDV
LVVNESEAQT FTGHGRDKPQ ALLELTPRAV LTLGVSGAWY GDREGVQVHV PAVPVEAVDS
TAAGDAFSAA LAVGWGEGRE LVDAVRWATA AGAACARRLG TSVALPRRDE IDELYRPG