Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1202 |
Symbol | |
ID | 5057652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 1354690 |
End bp | 1355586 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640473471 |
Product | ribokinase-like domain-containing protein |
Protein accession | YP_001158050 |
Protein GI | 145593753 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | [TIGR02152] ribokinase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.744137 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACAGA CCCGGGTGGT CGTCCTGGGC AGCGCCAACA TGGACCTCGT GGCGACCGCC GCGACGCTGC CCCGACCGGG GGAGACACTG CTCGGCGCGG ATTTCGTCAT GGTGCCCGGC GGCAAGGGCG CCAACCAGGC CATCGCGGCG GCGCGGGCCG GCGCGGCCTG TACCTTTCTC GGTGCCATCG GCTCCGACGC CTTCGGCGTT ACTCTGCGTG CCCGCATCAC CGCGGCCGGA GTGGACACCG GACACCTGCG GGTCGCGTAC GGTGCCTCCG GGGTCGCCCT GGTGATGGTC AACGCCGAGG GGGAGAACGC CATCGTGGTC AGTCCCGGCG CCAACGCCAC GATGACCGGG CTGACCGAGT CGGAGCTGAC GGCCGTACGC GAGGCGGACG TGCTGGTCGC CCAGCTGGAG ATCCCGGTGG AGACCGTTAC CGAGGCGGCG GTGGCGGCGC GTGCCGCCGG CACCCGCGTG GTGCTCAACG CCGCGCCGGC CCGGACCGTG CCGGCGGAGC TCTTCGCCGC CACCGACGTG CTTGTGGTCA ATGAGAGCGA GGCACAGACG TTCACCGGTC ACGGTCGGGA CAAGCCGCAG GCGCTACTGG AGCTGACCCC CCGGGCGGTG CTCACCCTCG GCGTCTCCGG CGCCTGGTAC GGCGACCGGG AGGGCGTCCA GGTGCACGTC CCGGCGGTGC CGGTCGAGGC GGTCGACTCG ACGGCGGCCG GCGACGCGTT CTCGGCAGCG CTTGCGGTCG GCTGGGGCGA GGGGCGCGAG CTGGTGGACG CGGTGCGGTG GGCGACGGCC GCTGGCGCGG CGTGTGCCCG GCGACTCGGC ACTTCGGTGG CGTTGCCCCG CCGGGACGAG ATCGACGAGC TGTACCGGCC GGGCTGA
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Protein sequence | MPQTRVVVLG SANMDLVATA ATLPRPGETL LGADFVMVPG GKGANQAIAA ARAGAACTFL GAIGSDAFGV TLRARITAAG VDTGHLRVAY GASGVALVMV NAEGENAIVV SPGANATMTG LTESELTAVR EADVLVAQLE IPVETVTEAA VAARAAGTRV VLNAAPARTV PAELFAATDV LVVNESEAQT FTGHGRDKPQ ALLELTPRAV LTLGVSGAWY GDREGVQVHV PAVPVEAVDS TAAGDAFSAA LAVGWGEGRE LVDAVRWATA AGAACARRLG TSVALPRRDE IDELYRPG
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