Gene Strop_1196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1196 
Symbol 
ID5057646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1348112 
End bp1349143 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content72% 
IMG OID640473465 
ProductATPase domain-containing protein 
Protein accessionYP_001158044 
Protein GI145593747 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGAAC TGGCGCTGAT CTTCGCATTC GCGCTCGGTC CGGCGCTCTG CGTCGGCGCG 
GCCGGCGCGC TCGCCCTGCG CCTGCTGCGC GGGCGTTCGG TGACGGTACA CATCGTCACC
CTGCTGGTAG TCGCGGTGAC CGCAATGGTG GCCGCGGTAG CCGCGGTAGC CGAGGCAATG
TTCCTCTCCG CACACGACCG CGACGTGGTG CTGATCACGG TGGCAGCGGC GGCCATGGTG
AGCCTCACGG TCGGCTGGCT CTTCGGGCGT CGCCTGGCTG CCGCCGCGGT CTGGGCGGAC
CAGGCCCGGC AGCGGGAGCG TCAGATCGAA CAGGGTCGGC GGGACCTCGT CGCCTGGGTC
TCCCACGACC TGCGAACCCC GCTGGCCGGG CTGCGGGCGA TGGCCGAGGC GTTGGAGGAC
CGGGTGGTCG ACGATCCCGC GACGGTGAGC GAGTACCACC ACCGGATTCG GGTGGAGACC
GATCGGATGA CCCGCCTGGT GGACGACCTC TTCGAGCTCT CCCGAATCAA CGCTGGCGCC
TTGCGCCTGA CCATGTCGGC GGTGCCCCTG GGCGATGTCG TGTCCGACGC CGTCGCCAGC
ACCGCACCGC TGGCGACCGC CTGCCGGGTC CACCTGCTGG CACCCGACTC GGGTTGGCCC
ACCGTACTGG CCAGTGAGCC CGAGCTGGCC CGGGTGGTGG GGAATCTGCT GATCAACGCC
GTCCGTTACA CACCGTCGGA GGGAACCGTA CGGGTCGAGG CCGGGGCGGA GACCGACTGG
GCTTGGCTGG CCGTGGCGGA CACCTGCGGC GGCATCCCGG AGGATGATCT GCCCCGCGTC
TTCGATGTCG CCTTCCGCGG CGAGCGGGCC CGCACCCCCC GCCCCAGCAC CGGGGAGGTG
GCCAGCTCCG GGGGGCTGGG ACTGGCGATC GTGCGGGGAC TGGTCGAGGC GCACGGCGGC
CGGGTACAGG TCCGCAACAC CACCACCGGG TGTCGGTTCG AGGTCCGACT GCCACGTCCG
AGAACCATCT GA
 
Protein sequence
MGELALIFAF ALGPALCVGA AGALALRLLR GRSVTVHIVT LLVVAVTAMV AAVAAVAEAM 
FLSAHDRDVV LITVAAAAMV SLTVGWLFGR RLAAAAVWAD QARQRERQIE QGRRDLVAWV
SHDLRTPLAG LRAMAEALED RVVDDPATVS EYHHRIRVET DRMTRLVDDL FELSRINAGA
LRLTMSAVPL GDVVSDAVAS TAPLATACRV HLLAPDSGWP TVLASEPELA RVVGNLLINA
VRYTPSEGTV RVEAGAETDW AWLAVADTCG GIPEDDLPRV FDVAFRGERA RTPRPSTGEV
ASSGGLGLAI VRGLVEAHGG RVQVRNTTTG CRFEVRLPRP RTI