| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1187 |
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| Symbol | |
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| ID | 5057637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 1333471 |
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| End bp | 1334751 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640473456 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001158035 |
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| Protein GI | 145593738 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.118326 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAACAC GTTTGGCCGG GCTTGCCCTG TCGTCGGCCG TGTTGACAGC GCTCGCGGGA
TGCGGGCTGT CCGGCACGGA CTCCAGTGAC GACCAGGTCG ATATCACCGG CGAGATCAAA
GGCACCGTGA CCCTGCAGAC CTGGGCCCTG AAGCCCAAGT TCACCGACTA CATGCAGGGT
GTGATCGACG GCTTTGAGGA GAAGTACCCG GGGACGACCG TCAAGTGGCT GGACCAGCCC
GGTGACGGTT ACTCGGAGAA GGTGCTCAGC CAGGCGGCCA GCAATGAGCT GCCCGACGTG
ACGAATCTCC CACCGGACTT CGCCCTGCCC CTCGCCGAGC AGGGGCTGTT GCTCGACGTC
GACCAGGCTG ACGACAAGCT CCGTGAGGAG TACGTCGAGG GCGCCATCGG CTCCTACGAG
TTCGCCGGTC TGACCGGGGT CTTCGGCTAC CCGTGGTACC TGAACACCGA CGTGAACTTC
TGGAACACGG AGCTGCTGGC CAAGTACGGC CTGGACGCGG ACAACCTGCC GACCACGATG
GAGGAGATGG TCGCCCAGGC CCGGATCGTC AAGGAGAAGT CCGGCGGCGC GGTGCACCTG
ATGAGCCGCA AGCCCGGCGT CGAGGACCTT ACCCAGGCCG GCGTCGACAT CATCTCGGAG
GACGGCACGG AGTTCGTCTT CAACACCCCC GAGGCCGTGG CGGTTCTGGA CCTGTACCGG
GACGCGTTCG CCGAGGGGCT CCTGCCCCGC AACGTGCTCA CCGACGCATA CCTCGGCAAC
ATGGACCTGT TCAAGAAGCA GCAGGTCGCC TGGACCACCG GTGGCGGTAA CTCGATCACC
GACATCGCGG TCGACAACCC GTCGCTGGCC GAGAAGGTCA TCGCGTCGCC GTCGATCGGT
ACCCCGTCGC TGTACACCCA GGGGGTATCA GTGGCGAAGA ACAGTGACAA CCTGCCCGCG
GCCGTTGCCC TCGCCCGGTG GGTGACCAAC GCGGAGAACC AGGCAGCCTT CGCCGAGGTC
GTCCCCGGCA TCTTCCCGAG TACAGTTGCC TCGGCAGAGG ATCCGCAGTT CAGCCAGAGC
GACGGCAGCA ACGTCGGGGA AGCGAAGAAG ATCGCCTTCA CCTCGCTGGC GGACGCGGAG
TTGTTGAAGC CAGTCATCGT CGACCAGGCG ATGGACGACT TCATCAAGCA GCAGTTCTCC
CTGGCGATCA GCGGGGAGAT CACCTCGCAG CAGGCGCTGG ACAAGGCAGT CGAAAAGTGC
AACGAACTGC TCAACGACTG A
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| Protein sequence | MRTRLAGLAL SSAVLTALAG CGLSGTDSSD DQVDITGEIK GTVTLQTWAL KPKFTDYMQG
VIDGFEEKYP GTTVKWLDQP GDGYSEKVLS QAASNELPDV TNLPPDFALP LAEQGLLLDV
DQADDKLREE YVEGAIGSYE FAGLTGVFGY PWYLNTDVNF WNTELLAKYG LDADNLPTTM
EEMVAQARIV KEKSGGAVHL MSRKPGVEDL TQAGVDIISE DGTEFVFNTP EAVAVLDLYR
DAFAEGLLPR NVLTDAYLGN MDLFKKQQVA WTTGGGNSIT DIAVDNPSLA EKVIASPSIG
TPSLYTQGVS VAKNSDNLPA AVALARWVTN AENQAAFAEV VPGIFPSTVA SAEDPQFSQS
DGSNVGEAKK IAFTSLADAE LLKPVIVDQA MDDFIKQQFS LAISGEITSQ QALDKAVEKC
NELLND
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